Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2946738..2947209 | Replicon | chromosome |
| Accession | NZ_CP124337 | ||
| Organism | Escherichia coli strain AVS0971 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP90_RS14490 | Protein ID | WP_001303511.1 |
| Coordinates | 2946931..2947209 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP90_RS14485 | Protein ID | WP_001302048.1 |
| Coordinates | 2946738..2946929 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP90_RS14415 (2941805) | 2941805..2941972 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP90_RS14420 (2941983) | 2941983..2942246 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP90_RS14425 (2942248) | 2942248..2942466 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP90_RS14430 (2942468) | 2942468..2942683 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP90_RS14435 (2942684) | 2942684..2943043 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP90_RS14440 (2943040) | 2943040..2943216 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP90_RS14445 (2943209) | 2943209..2943391 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP90_RS14450 (2943520) | 2943520..2943831 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP90_RS14455 (2943824) | 2943824..2944078 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP90_RS14460 (2944075) | 2944075..2944497 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP90_RS14465 (2944538) | 2944538..2945500 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP90_RS14470 (2945523) | 2945523..2945948 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP90_RS14475 (2945945) | 2945945..2946247 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP90_RS14480 (2946346) | 2946346..2946717 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP90_RS14485 (2946738) | 2946738..2946929 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP90_RS14490 (2946931) | 2946931..2947209 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP90_RS14495 (2947501) | 2947501..2947653 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP90_RS14500 (2947665) | 2947665..2948003 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP90_RS14505 (2947992) | 2947992..2948186 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP90_RS14510 (2948753) | 2948753..2948941 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP90_RS14515 (2948938) | 2948938..2949126 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP90_RS14520 (2949222) | 2949222..2951693 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP90_RS14525 (2951755) | 2951755..2952024 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | sitABCD | - | 2839502..2960279 | 120777 | |
| - | inside | Prophage | - | - | 2900891..2960279 | 59388 | |
| - | inside | Prophage | sitABCD | - | 2832841..2960279 | 127438 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|