MGE detailed information
MGE type: Genomic_island MGE length: 27909 bp
Accession: NZ_CP124324 Location: 2946135..2974043 Organism: Escherichia coli strain AVS0536 Replicon: chromosome
Accession: NZ_CP124324 Location: 2946135..2974043 Organism: Escherichia coli strain AVS0536 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP54_RS14370 (2941464) | 2941464..2943056 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| QJP54_RS14375 (2943053) | 2943053..2943259 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| QJP54_RS14380 (2943243) | 2943243..2945171 | - | 1929 | WP_060624626.1 | phage terminase large subunit family protein | - |
| QJP54_RS14385 (2945143) | 2945143..2945652 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| QJP54_RS14390 (2946267) | 2946267..2946404 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| QJP54_RS14395 (2946611) | 2946611..2946937 | - | 327 | WP_000830178.1 | TonB family protein | - |
| QJP54_RS14400 (2947248) | 2947248..2947715 | - | 468 | WP_064773083.1 | lysis protein | - |
| QJP54_RS14405 (2947718) | 2947718..2947849 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| QJP54_RS14410 (2947864) | 2947864..2948046 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| QJP54_RS14415 (2948203) | 2948203..2948736 | - | 534 | WP_001092866.1 | lysozyme | - |
| QJP54_RS14420 (2949328) | 2949328..2949663 | - | 336 | Protein_2838 | YdfR family protein | - |
| QJP54_RS14425 (2949668) | 2949668..2949883 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| QJP54_RS14430 (2950033) | 2950033..2950194 | - | 162 | WP_001309421.1 | hypothetical protein | - |
| QJP54_RS14435 (2950194) | 2950194..2950379 | - | 186 | Protein_2841 | DUF1737 domain-containing protein | - |
| QJP54_RS14440 (2950640) | 2950640..2950975 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| QJP54_RS14445 (2951046) | 2951046..2951162 | + | 117 | Protein_2843 | hypothetical protein | - |
| QJP54_RS14450 (2951256) | 2951256..2951387 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| QJP54_RS14465 (2952192) | 2952192..2953241 | - | 1050 | WP_001563803.1 | site-specific DNA-methyltransferase | - |
| QJP54_RS14470 (2953392) | 2953392..2953589 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| QJP54_RS14475 (2953816) | 2953816..2954637 | - | 822 | WP_032265151.1 | antitermination protein | - |
| QJP54_RS14480 (2954634) | 2954634..2955014 | - | 381 | WP_094315389.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QJP54_RS14485 (2955015) | 2955015..2956070 | - | 1056 | WP_094315388.1 | DUF968 domain-containing protein | - |
| QJP54_RS14490 (2956072) | 2956072..2956350 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| QJP54_RS14495 (2956509) | 2956509..2956583 | - | 75 | Protein_2851 | hypothetical protein | - |
| QJP54_RS14500 (2956741) | 2956741..2957844 | - | 1104 | WP_000401168.1 | XRE family transcriptional regulator | - |
| QJP54_RS14505 (2957825) | 2957825..2958475 | - | 651 | WP_001004956.1 | hypothetical protein | - |
| QJP54_RS14510 (2958641) | 2958641..2958796 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QJP54_RS14515 (2959088) | 2959088..2959432 | - | 345 | WP_000206826.1 | hypothetical protein | - |
| QJP54_RS14520 (2959429) | 2959429..2959596 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP54_RS14525 (2959607) | 2959607..2959870 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP54_RS14530 (2959872) | 2959872..2960090 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP54_RS14535 (2960092) | 2960092..2960307 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP54_RS14540 (2960308) | 2960308..2960667 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP54_RS14545 (2960664) | 2960664..2960840 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP54_RS14550 (2960833) | 2960833..2961015 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP54_RS14555 (2961144) | 2961144..2961455 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP54_RS14560 (2961448) | 2961448..2961702 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP54_RS14565 (2961699) | 2961699..2962121 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP54_RS14570 (2962162) | 2962162..2963124 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP54_RS14575 (2963147) | 2963147..2963572 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP54_RS14580 (2963569) | 2963569..2963871 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP54_RS14585 (2963970) | 2963970..2964341 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP54_RS14590 (2964362) | 2964362..2964553 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QJP54_RS14595 (2964555) | 2964555..2964833 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJP54_RS14600 (2965125) | 2965125..2965277 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP54_RS14605 (2965289) | 2965289..2965627 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP54_RS14610 (2965616) | 2965616..2965810 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP54_RS14615 (2966377) | 2966377..2966565 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP54_RS14620 (2966562) | 2966562..2966750 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP54_RS14625 (2966846) | 2966846..2969317 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP54_RS14630 (2969379) | 2969379..2969648 | + | 270 | WP_000003742.1 | excisionase | - |
| QJP54_RS14635 (2969617) | 2969617..2970735 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| QJP54_RS14640 (2970902) | 2970902..2971696 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QJP54_RS14645 (2971693) | 2971693..2972739 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QJP54_RS14650 (2972797) | 2972797..2973258 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| QJP54_RS14655 (2973255) | 2973255..2974043 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| QJP54_RS14660 (2974181) | 2974181..2975002 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| QJP54_RS14665 (2975018) | 2975018..2975929 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| QJP54_RS14670 (2975958) | 2975958..2977202 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QJP54_RS14675 (2977202) | 2977202..2977903 | - | 702 | WP_001033695.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|