Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | paaR-paaA-parE/- |
Location | 2964362..2964833 | Replicon | chromosome |
Accession | NZ_CP124324 | ||
Organism | Escherichia coli strain AVS0536 |
Toxin (Protein)
Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
Locus tag | QJP54_RS14595 | Protein ID | WP_001303511.1 |
Coordinates | 2964555..2964833 (+) | Length | 93 a.a. |
Antitoxin (Protein)
Gene name | paaA | Uniprot ID | Q8XAD5 |
Locus tag | QJP54_RS14590 | Protein ID | WP_001302048.1 |
Coordinates | 2964362..2964553 (+) | Length | 64 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
QJP54_RS14520 (2959429) | 2959429..2959596 | - | 168 | WP_000207997.1 | hypothetical protein | - |
QJP54_RS14525 (2959607) | 2959607..2959870 | - | 264 | WP_000224216.1 | hypothetical protein | - |
QJP54_RS14530 (2959872) | 2959872..2960090 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
QJP54_RS14535 (2960092) | 2960092..2960307 | - | 216 | WP_000510387.1 | hypothetical protein | - |
QJP54_RS14540 (2960308) | 2960308..2960667 | - | 360 | WP_001289986.1 | hypothetical protein | - |
QJP54_RS14545 (2960664) | 2960664..2960840 | - | 177 | WP_021534704.1 | hypothetical protein | - |
QJP54_RS14550 (2960833) | 2960833..2961015 | - | 183 | WP_001224665.1 | hypothetical protein | - |
QJP54_RS14555 (2961144) | 2961144..2961455 | - | 312 | WP_021534703.1 | hypothetical protein | - |
QJP54_RS14560 (2961448) | 2961448..2961702 | - | 255 | WP_000004322.1 | hypothetical protein | - |
QJP54_RS14565 (2961699) | 2961699..2962121 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
QJP54_RS14570 (2962162) | 2962162..2963124 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
QJP54_RS14575 (2963147) | 2963147..2963572 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
QJP54_RS14580 (2963569) | 2963569..2963871 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
QJP54_RS14585 (2963970) | 2963970..2964341 | + | 372 | WP_001169687.1 | hypothetical protein | - |
QJP54_RS14590 (2964362) | 2964362..2964553 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
QJP54_RS14595 (2964555) | 2964555..2964833 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
QJP54_RS14600 (2965125) | 2965125..2965277 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
QJP54_RS14605 (2965289) | 2965289..2965627 | + | 339 | WP_000394541.1 | hypothetical protein | - |
QJP54_RS14610 (2965616) | 2965616..2965810 | - | 195 | WP_001295058.1 | hypothetical protein | - |
QJP54_RS14615 (2966377) | 2966377..2966565 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
QJP54_RS14620 (2966562) | 2966562..2966750 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
QJP54_RS14625 (2966846) | 2966846..2969317 | + | 2472 | WP_032284123.1 | exonuclease | - |
QJP54_RS14630 (2969379) | 2969379..2969648 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Genomic island | - | - | 2946135..2974043 | 27908 | |
- | inside | Prophage | sitABCD | - | 2829282..2977903 | 148621 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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