MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 48006 bp
Accession: NZ_CP123990 Location: 5670873..5718878 Organism: Variovorax paradoxus strain MGMM5 Replicon: chromosome
Accession: NZ_CP123990 Location: 5670873..5718878 Organism: Variovorax paradoxus strain MGMM5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QHG62_RS27040 (QHG62_27040) | 5666512..5666907 | - | 396 | WP_281148655.1 | hypothetical protein | - |
| QHG62_RS27045 (QHG62_27045) | 5666910..5668046 | - | 1137 | WP_281148656.1 | beta-ketoacyl-ACP synthase III | - |
| QHG62_RS27050 (QHG62_27050) | 5668036..5669016 | - | 981 | WP_281148657.1 | dialkylrecorsinol condensing enzyme | - |
| QHG62_RS27055 (QHG62_27055) | 5669172..5670818 | - | 1647 | Protein_5354 | ABC transporter substrate-binding protein | - |
| QHG62_RS27060 (QHG62_27060) | 5671085..5671393 | - | 309 | WP_258507745.1 | DUF2160 domain-containing protein | - |
| QHG62_RS27065 (QHG62_27065) | 5671395..5672207 | - | 813 | WP_126749023.1 | carbohydrate ABC transporter permease | - |
| QHG62_RS27070 (QHG62_27070) | 5672204..5673094 | - | 891 | WP_281148659.1 | sugar ABC transporter permease | - |
| QHG62_RS27075 (QHG62_27075) | 5673150..5674220 | - | 1071 | WP_281148660.1 | ABC transporter ATP-binding protein | - |
| QHG62_RS27080 (QHG62_27080) | 5674223..5675296 | - | 1074 | WP_281148664.1 | ABC transporter ATP-binding protein | - |
| QHG62_RS27085 (QHG62_27085) | 5675296..5676969 | - | 1674 | WP_281148665.1 | glycerol-3-phosphate dehydrogenase | - |
| QHG62_RS27090 (QHG62_27090) | 5677091..5677858 | + | 768 | WP_281148666.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| QHG62_RS27095 (QHG62_27095) | 5677987..5678517 | + | 531 | WP_281148667.1 | hypothetical protein | VF |
| QHG62_RS27100 (QHG62_27100) | 5678832..5681240 | - | 2409 | WP_281148668.1 | DNA polymerase II | - |
| QHG62_RS27105 (QHG62_27105) | 5681760..5683682 | - | 1923 | WP_281148669.1 | hypothetical protein ; Integrase | Integrase |
| QHG62_RS27110 (QHG62_27110) | 5683679..5683969 | - | 291 | WP_281148670.1 | hypothetical protein | - |
| QHG62_RS27115 (QHG62_27115) | 5684563..5685645 | - | 1083 | WP_281148671.1 | ParB/RepB/Spo0J family partition protein | - |
| QHG62_RS27120 (QHG62_27120) | 5686060..5687214 | - | 1155 | WP_281148672.1 | hypothetical protein | VF |
| QHG62_RS27125 (QHG62_27125) | 5687839..5689215 | + | 1377 | WP_281148673.1 | replication initiation protein | - |
| QHG62_RS27130 (QHG62_27130) | 5689727..5690779 | + | 1053 | WP_281148674.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| QHG62_RS27135 (QHG62_27135) | 5690790..5691176 | + | 387 | WP_281148676.1 | chorismate mutase family protein | - |
| QHG62_RS27140 (QHG62_27140) | 5691305..5691925 | + | 621 | WP_281148677.1 | hypothetical protein | - |
| QHG62_RS27145 (QHG62_27145) | 5692146..5692547 | + | 402 | WP_281148678.1 | hypothetical protein | - |
| QHG62_RS27150 (QHG62_27150) | 5692537..5692830 | - | 294 | WP_281148679.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QHG62_RS27155 (QHG62_27155) | 5692838..5693137 | - | 300 | WP_281148681.1 | ribbon-helix-helix protein, CopG family | - |
| QHG62_RS27160 (QHG62_27160) | 5693513..5694373 | - | 861 | WP_281148682.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QHG62_RS27165 (QHG62_27165) | 5694370..5694981 | - | 612 | WP_281148683.1 | AbiEi antitoxin N-terminal domain-containing protein | Antitoxin Detail |
| QHG62_RS27170 (QHG62_27170) | 5695102..5695325 | + | 224 | Protein_5377 | helix-turn-helix domain-containing protein | - |
| QHG62_RS27175 (QHG62_27175) | 5695227..5695535 | - | 309 | WP_281151845.1 | hypothetical protein | - |
| QHG62_RS27180 (QHG62_27180) | 5695519..5695776 | + | 258 | WP_281151831.1 | plasmid partitioning protein RepB C-terminal domain-containing protein | - |
| QHG62_RS27185 (QHG62_27185) | 5695903..5696253 | - | 351 | WP_281148684.1 | hypothetical protein | - |
| QHG62_RS27190 (QHG62_27190) | 5696278..5696685 | - | 408 | WP_281148685.1 | hypothetical protein | - |
| QHG62_RS27195 (QHG62_27195) | 5696717..5697019 | - | 303 | WP_281148686.1 | hypothetical protein | - |
| QHG62_RS27200 (QHG62_27200) | 5697190..5697399 | + | 210 | WP_281148687.1 | hypothetical protein | - |
| QHG62_RS27205 (QHG62_27205) | 5697740..5702782 | + | 5043 | WP_281148688.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| QHG62_RS27210 (QHG62_27210) | 5703190..5704443 | + | 1254 | WP_281148689.1 | hypothetical protein ; Integrase | Integrase |
| QHG62_RS27215 (QHG62_27215) | 5704648..5704983 | + | 336 | WP_281148690.1 | hypothetical protein | - |
| QHG62_RS27220 (QHG62_27220) | 5705067..5709641 | + | 4575 | WP_281148691.1 | ATP-binding protein | - |
| QHG62_RS27225 (QHG62_27225) | 5709908..5710750 | - | 843 | WP_281148692.1 | hypothetical protein | - |
| QHG62_RS27230 (QHG62_27230) | 5710792..5711226 | - | 435 | Protein_5389 | IS21 family transposase ISVapa4 | Transposase |
| QHG62_RS27235 (QHG62_27235) | 5711350..5711979 | + | 630 | Protein_5390 | IS3 family transposase ISPa56 | Transposase |
| QHG62_RS27240 (QHG62_27240) | 5712070..5713359 | - | 1290 | WP_281148694.1 | phospholipase D-like domain-containing protein | - |
| QHG62_RS27245 (QHG62_27245) | 5713950..5714588 | - | 639 | WP_281148695.1 | hypothetical protein | - |
| QHG62_RS27250 (QHG62_27250) | 5714948..5715142 | - | 195 | Protein_5393 | IS3 family transposase ISAtu3 | Transposase |
| QHG62_RS27255 (QHG62_27255) | 5715219..5715530 | - | 312 | WP_281148696.1 | helix-turn-helix transcriptional regulator | - |
| QHG62_RS27260 (QHG62_27260) | 5715744..5716319 | + | 576 | WP_281148697.1 | XRE family transcriptional regulator | - |
| QHG62_RS27265 (QHG62_27265) | 5716426..5718093 | + | 1668 | WP_281148699.1 | N-6 DNA methylase | - |
| QHG62_RS27270 (QHG62_27270) | 5718083..5719102 | + | 1020 | WP_281148700.1 | hypothetical protein | - |
| QHG62_RS27275 (QHG62_27275) | 5719428..5720714 | - | 1287 | WP_281148701.1 | phospholipase D-like domain-containing protein | - |
| QHG62_RS27280 (QHG62_27280) | 5720711..5720977 | - | 267 | WP_281148702.1 | hypothetical protein | - |
| QHG62_RS27285 (QHG62_27285) | 5721311..5721889 | + | 579 | WP_281148703.1 | hypothetical protein | - |
| QHG62_RS27290 (QHG62_27290) | 5721882..5722988 | + | 1107 | WP_281148704.1 | relaxase/mobilization nuclease domain-containing protein | - |
| QHG62_RS27295 (QHG62_27295) | 5723233..5723559 | - | 327 | WP_281148705.1 | NIPSNAP family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|