MGE detailed information
MGE type: Genomic_island MGE length: 16242 bp
Accession: NZ_CP123963 Location: 3643075..3659316 Organism: Escherichia coli strain L6-21 Replicon: chromosome
Accession: NZ_CP123963 Location: 3643075..3659316 Organism: Escherichia coli strain L6-21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QC817_RS17895 (3638578) | 3638578..3638979 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3639697) | 3639697..3639777 | - | 81 | NuclAT_9 | - | - |
| - (3639697) | 3639697..3639777 | - | 81 | NuclAT_9 | - | - |
| - (3639697) | 3639697..3639777 | - | 81 | NuclAT_9 | - | - |
| - (3639697) | 3639697..3639777 | - | 81 | NuclAT_9 | - | - |
| QC817_RS17900 (3639037) | 3639037..3640281 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| QC817_RS17905 (3640373) | 3640373..3640831 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| QC817_RS17910 (3641092) | 3641092..3642549 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| QC817_RS17915 (3642606) | 3642606..3643127 | - | 522 | Protein_3502 | peptide chain release factor H | - |
| QC817_RS17920 (3643126) | 3643126..3643329 | - | 204 | Protein_3503 | RtcB family protein | - |
| QC817_RS17925 (3643575) | 3643575..3644027 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| QC817_RS17930 (3644037) | 3644037..3644435 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QC817_RS17935 (3644438) | 3644438..3644731 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QC817_RS17940 (3644783) | 3644783..3645838 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| QC817_RS17945 (3645909) | 3645909..3646694 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| QC817_RS17950 (3646666) | 3646666..3648378 | + | 1713 | Protein_3509 | hypothetical protein | VF |
| QC817_RS17955 (3648602) | 3648602..3649099 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| QC817_RS17960 (3649275) | 3649275..3650048 | - | 774 | WP_015675129.1 | hypothetical protein | VF |
| QC817_RS17965 (3650234) | 3650234..3650494 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| QC817_RS17970 (3650497) | 3650497..3650775 | + | 279 | WP_072645854.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| QC817_RS17975 (3650931) | 3650931..3651671 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QC817_RS17980 (3651642) | 3651642..3652409 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| QC817_RS17985 (3652615) | 3652615..3653193 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| QC817_RS17990 (3653433) | 3653433..3655877 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| QC817_RS17995 (3655920) | 3655920..3656366 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| QC817_RS18000 (3656547) | 3656547..3657317 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| QC817_RS18005 (3657358) | 3657358..3658494 | - | 1137 | WP_072645853.1 | ISAs1 family transposase ISEc1 | Transposase |
| QC817_RS18010 (3658925) | 3658925..3659101 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| QC817_RS18015 (3659098) | 3659098..3659316 | - | 219 | WP_001101841.1 | hypothetical protein | - |
| QC817_RS18020 (3659294) | 3659294..3662296 | - | 3003 | WP_032161390.1 | RHS repeat-associated core domain-containing protein | - |
| QC817_RS18025 (3662372) | 3662372..3662833 | - | 462 | WP_232581897.1 | type VI secretion protein VgrG | - |
| QC817_RS18030 (3662853) | 3662853..3663590 | - | 738 | Protein_3525 | type VI secretion system tip protein TssI/VgrG | - |
| QC817_RS18035 (3663630) | 3663630..3663767 | - | 138 | WP_001297813.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|