NZ_CP1239632337969..2349215

MGE detailed information

MGE type: Genomic_island        MGE length: 11247 bp
Accession: NZ_CP123963        Location: 2337969..2349215         Organism: Escherichia coli strain L6-21       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QC817_RS11385 (2333216) 2333216..2335588 - 2373 WP_024238758.1 TonB-dependent receptor plug domain-containing protein -
QC817_RS11390 (2335626) 2335626..2337200 - 1575 Protein_2229 ABC transporter ATP-binding protein/permease -
QC817_RS11400 (2337972) 2337972..2339297 - 1326 Protein_2231 sulfatase -
QC817_RS11405 (2339699) 2339699..2340460 - 762 WP_072646119.1 acid stress response transcriptional regulator YdeO -
QC817_RS11410 (2340535) 2340535..2340732 - 198 WP_000543384.1 two-component system connector SafA -
QC817_RS11415 (2340980) 2340980..2343259 - 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
QC817_RS11420 (2343593) 2343593..2344507 - 915 WP_000520676.1 Type 1 fimbrin D-mannose specific adhesin VF
QC817_RS11425 (2344566) 2344566..2345069 - 504 WP_000825452.1 Protein FimG VF
QC817_RS11430 (2345082) 2345082..2345612 - 531 WP_000876763.1 Protein FimF VF
QC817_RS11435 (2345626) 2345626..2346852 - 1227 Protein_2238 Outer membrane usher protein FimD VF
QC817_RS11440 (2347107) 2347107..2347315 - 209 Protein_2239 AraC family transcriptional regulator -
QC817_RS11445 (2347627) 2347627..2348949 - 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
QC817_RS11450 (2348949) 2348949..2349215 - 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.005
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.005
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.005
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.005
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.003
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.006
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.005
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.005
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.005
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.005
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.005
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.005
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.005