MGE detailed information
MGE type: Genomic_island MGE length: 9309 bp
Accession: NZ_CP123909 Location: 5256043..5265351 Organism: Pseudomonas atacamensis strain MGMM4 Replicon: chromosome
Accession: NZ_CP123909 Location: 5256043..5265351 Organism: Pseudomonas atacamensis strain MGMM4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QG303_RS23930 (QG303_23930) | 5253890..5254885 | + | 996 | WP_122699955.1 | catabolite repressor/activator | - |
| QG303_RS23935 (QG303_23935) | 5254889..5255665 | + | 777 | WP_281120392.1 | TatD family hydrolase | - |
| QG303_RS23940 (QG303_23940) | 5255939..5256412 | - | 474 | WP_258710993.1 | hypothetical protein | - |
| QG303_RS23945 (QG303_23945) | 5256689..5256880 | + | 192 | Protein_4746 | TatD family hydrolase | - |
| QG303_RS23950 (QG303_23950) | 5257003..5259033 | - | 2031 | WP_281120393.1 | hypothetical protein | VF |
| QG303_RS23955 (QG303_23955) | 5259244..5260083 | - | 840 | WP_281120394.1 | regulatory signaling modulator protein AmpE | - |
| QG303_RS23960 (QG303_23960) | 5260080..5260640 | - | 561 | WP_122880542.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| QG303_RS23965 (QG303_23965) | 5260705..5262882 | - | 2178 | WP_281120395.1 | DUF1631 domain-containing protein | - |
| QG303_RS23970 (QG303_23970) | 5263150..5263998 | + | 849 | WP_281120396.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| QG303_RS23975 (QG303_23975) | 5264107..5264406 | - | 300 | WP_281120397.1 | DUF6388 family protein | - |
| QG303_RS23980 (QG303_23980) | 5264762..5265013 | + | 252 | WP_281120398.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| QG303_RS23985 (QG303_23985) | 5265010..5265351 | + | 342 | WP_016771749.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| QG303_RS23995 (QG303_23995) | 5265601..5267706 | - | 2106 | WP_024011572.1 | polyribonucleotide nucleotidyltransferase | - |
| QG303_RS24000 (QG303_24000) | 5267911..5268180 | - | 270 | WP_016771751.1 | 30S ribosomal protein S15 | - |
| QG303_RS24005 (QG303_24005) | 5268324..5269241 | - | 918 | WP_160767822.1 | tRNA pseudouridine(55) synthase TruB | - |
| QG303_RS24010 (QG303_24010) | 5269246..5269647 | - | 402 | WP_016771753.1 | 30S ribosome-binding factor RbfA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|