MGE detailed information
MGE type: Prophage MGE length: 41399 bp
Accession: NZ_CP123365 Location: 298303..339701 Organism: Shigella flexneri strain MMGSG_23 Replicon: chromosome
Accession: NZ_CP123365 Location: 298303..339701 Organism: Shigella flexneri strain MMGSG_23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PFB08_RS01425 (294352) | 294352..294873 | + | 522 | Protein_276 | C40 family peptidase | - |
| PFB08_RS01430 (295049) | 295049..295546 | + | 498 | WP_000006251.1 | REP-associated tyrosine transposase RayT | - |
| PFB08_RS01435 (295763) | 295763..297475 | - | 1713 | Protein_278 | flagellar biosynthesis protein FlhA | - |
| PFB08_RS01440 (297447) | 297447..298232 | + | 786 | WP_000207560.1 | putative lateral flagellar export/assembly protein LafU | - |
| PFB08_RS01445 (298303) | 298303..299358 | + | 1056 | WP_001226172.1 | DNA polymerase IV | - |
| PFB08_RS01450 (299410) | 299410..299703 | + | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| PFB08_RS01455 (299706) | 299706..300104 | + | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| PFB08_RS01460 (300114) | 300114..300566 | + | 453 | WP_001059860.1 | GNAT family N-acetyltransferase | - |
| PFB08_RS01465 (300812) | 300812..301855 | + | 1044 | WP_005053205.1 | RNA ligase RtcB family protein | - |
| PFB08_RS01470 (301917) | 301917..302531 | + | 615 | Protein_285 | peptide chain release factor H | - |
| PFB08_RS01475 (302588) | 302588..304045 | - | 1458 | WP_001293030.1 | cytosol nonspecific dipeptidase | - |
| PFB08_RS01480 (304307) | 304307..304765 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (305361) | 305361..305441 | + | 81 | NuclAT_6 | - | - |
| - (305361) | 305361..305441 | + | 81 | NuclAT_6 | - | - |
| - (305361) | 305361..305441 | + | 81 | NuclAT_6 | - | - |
| - (305361) | 305361..305441 | + | 81 | NuclAT_6 | - | - |
| PFB08_RS01485 (304857) | 304857..306101 | + | 1245 | WP_000189558.1 | esterase FrsA | - |
| PFB08_RS01490 (306159) | 306159..306560 | + | 402 | WP_000174678.1 | sigma factor-binding protein Crl | - |
| PFB08_RS01495 (306599) | 306599..307654 | - | 1056 | WP_000749864.1 | phosphoporin PhoE | - |
| PFB08_RS01500 (307830) | 307830..308527 | + | 698 | WP_227804306.1 | IS1 family transposase IS1X2 | Transposase |
| PFB08_RS01505 (308718) | 308718..309821 | + | 1104 | WP_001285281.1 | glutamate 5-kinase | - |
| PFB08_RS01510 (309833) | 309833..311086 | + | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| PFB08_RS01520 (311291) | 311291..311749 | - | 459 | Protein_294 | site-specific integrase | - |
| PFB08_RS01530 (313004) | 313004..313675 | - | 672 | Protein_296 | hypothetical protein ; Integrase | Integrase |
| PFB08_RS01535 (313597) | 313597..314031 | - | 435 | WP_077941726.1 | helix-turn-helix domain-containing protein | - |
| PFB08_RS01540 (313947) | 313947..314252 | - | 306 | WP_000206732.1 | protein YfdT | - |
| PFB08_RS01545 (314252) | 314252..314611 | - | 360 | WP_000563002.1 | hypothetical protein | - |
| PFB08_RS01550 (314595) | 314595..315804 | - | 1210 | Protein_300 | IS3 family transposase IS629 | Transposase |
| PFB08_RS01555 (316047) | 316047..317203 | + | 1157 | WP_094081509.1 | IS3 family transposase ISSd1 | Transposase |
| PFB08_RS01560 (317249) | 317249..317605 | + | 357 | Protein_302 | integrase | - |
| PFB08_RS01565 (317867) | 317867..318229 | + | 363 | WP_000915845.1 | Prophage bactoprenol-linked glucose translocase | VF |
| PFB08_RS01570 (318226) | 318226..319155 | + | 930 | WP_000703658.1 | Prophage bactoprenol glucosyl transferase | VF |
| PFB08_RS01575 (319152) | 319152..320612 | + | 1461 | WP_000590793.1 | hypothetical protein | VF |
| PFB08_RS01580 (321002) | 321002..322192 | - | 1191 | WP_001111520.1 | IS4 family transposase ISSfl9 | Transposase |
| PFB08_RS01585 (322643) | 322643..323692 | + | 1050 | WP_000282635.1 | acyltransferase family protein | - |
| PFB08_RS01590 (324465) | 324465..324899 | - | 435 | WP_001223322.1 | tail fiber assembly protein | - |
| PFB08_RS01595 (324871) | 324871..325521 | - | 651 | WP_000554647.1 | hypothetical protein | - |
| PFB08_RS01605 (326916) | 326916..328079 | + | 1164 | WP_000051894.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| PFB08_RS01610 (328428) | 328428..329600 | + | 1173 | WP_000551008.1 | acyltransferase | - |
| PFB08_RS01615 (329654) | 329654..330277 | - | 624 | WP_005060548.1 | hypothetical protein | - |
| PFB08_RS01625 (331586) | 331586..332795 | - | 1210 | Protein_315 | IS3 family transposase IS629 | Transposase |
| PFB08_RS01630 (332946) | 332946..334061 | + | 1116 | WP_005053118.1 | diguanylate cyclase AdrA | - |
| PFB08_RS01635 (334078) | 334078..334887 | - | 810 | WP_001295331.1 | pyrroline-5-carboxylate reductase | - |
| PFB08_RS01640 (335007) | 335007..335465 | + | 459 | WP_000158164.1 | YaiI/YqxD family protein | - |
| PFB08_RS01645 (335648) | 335648..336172 | + | 525 | WP_000193385.1 | shikimate kinase AroL | - |
| PFB08_RS01650 (336222) | 336222..336413 | + | 192 | WP_001142439.1 | protein YaiA | - |
| PFB08_RS01655 (336671) | 336671..337348 | + | 678 | WP_001276420.1 | AroM family protein | - |
| PFB08_RS01660 (337420) | 337420..337704 | + | 285 | WP_000941942.1 | pyrimidine/purine nucleoside phosphorylase | - |
| PFB08_RS01665 (337859) | 337859..338194 | + | 336 | Protein_323 | DUF2773 domain-containing protein | - |
| PFB08_RS01670 (338191) | 338191..338646 | + | 456 | WP_000194195.1 | hypothetical protein | - |
| PFB08_RS01675 (338724) | 338724..339635 | - | 912 | WP_005053105.1 | recombination-associated protein RdgC | - |
| PFB08_RS01680 (339760) | 339760..340668 | + | 909 | WP_001219335.1 | fructokinase | - |
| PFB08_RS01685 (340811) | 340811..341992 | - | 1182 | WP_011069261.1 | MFS transporter AraJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|