MGE detailed information
MGE type: IScluster/Tn MGE length: 2357 bp
Accession: NZ_CP123262 Location: 22598..24954 Organism: Escherichia coli strain YZLc4-1 Replicon: plasmid pYZLc4-1_138k
Accession: NZ_CP123262 Location: 22598..24954 Organism: Escherichia coli strain YZLc4-1 Replicon: plasmid pYZLc4-1_138k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4697_RS24375 (17659) | 17659..18888 | + | 1230 | WP_247194356.1 | hypothetical protein | - |
| N4697_RS24380 (19221) | 19221..19970 | + | 750 | WP_106141716.1 | EAL domain-containing protein | - |
| N4697_RS24385 (20015) | 20015..20689 | - | 675 | WP_232379284.1 | helix-turn-helix domain-containing protein | - |
| N4697_RS24390 (21130) | 21130..22014 | + | 885 | WP_000942222.1 | helix-turn-helix domain-containing protein | - |
| N4697_RS24395 (22151) | 22151..22297 | - | 147 | WP_162822579.1 | hypothetical protein | - |
| N4697_RS24400 (22297) | 22297..22538 | - | 242 | Protein_26 | hypothetical protein | - |
| N4697_RS24405 (22598) | 22598..23040 | + | 443 | Protein_27 | IS3 family transposase ISEc25 | Transposase |
| N4697_RS24410 (23225) | 23225..23455 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N4697_RS24415 (23452) | 23452..23868 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N4697_RS24420 (24221) | 24221..24307 | - | 87 | Protein_30 | IS66 family transposase IS679 | Transposase |
| N4697_RS24425 (24307) | 24307..24954 | - | 648 | WP_180391910.1 | IS66 family transposase IS679 | Transposase |
| N4697_RS24430 (25027) | 25027..25188 | + | 162 | WP_001384894.1 | hypothetical protein | - |
| N4697_RS24435 (25560) | 25560..26417 | - | 858 | WP_202374666.1 | (S)-acetoin forming diacetyl reductase | - |
| N4697_RS24440 (26519) | 26519..26737 | + | 219 | WP_001292878.1 | hypothetical protein | - |
| N4697_RS24445 (26780) | 26780..27877 | + | 1098 | WP_221686783.1 | choloylglycine hydrolase family protein | - |
| N4697_RS24450 (27960) | 27960..29612 | + | 1653 | WP_180391914.1 | NAD-dependent malic enzyme | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|