MGE detailed information
MGE type: Genomic_island MGE length: 11453 bp
Accession: NZ_CP123255 Location: 603645..615097 Organism: Escherichia coli strain YZMc17-1 Replicon: chromosome
Accession: NZ_CP123255 Location: 603645..615097 Organism: Escherichia coli strain YZMc17-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4680_RS02915 (598646) | 598646..599080 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| N4680_RS02920 (599098) | 599098..599976 | - | 879 | WP_001298314.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| N4680_RS02925 (599966) | 599966..600745 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| N4680_RS02930 (600756) | 600756..601229 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| N4680_RS02935 (601252) | 601252..602532 | - | 1281 | Protein_574 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| N4680_RS02940 (602781) | 602781..603590 | + | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| N4680_RS02945 (603645) | 603645..604109 | - | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| N4680_RS02950 (604109) | 604109..604444 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| N4680_RS02955 (604593) | 604593..606164 | - | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| N4680_RS02960 (606539) | 606539..607873 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| N4680_RS02965 (607889) | 607889..608659 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| N4680_RS02970 (608689) | 608689..609579 | + | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| N4680_RS02975 (609676) | 609676..610821 | + | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| N4680_RS02985 (611621) | 611621..612808 | - | 1188 | WP_001521377.1 | YhaC family protein | - |
| N4680_RS02990 (612830) | 612830..613369 | - | 540 | WP_000675749.1 | protein YhaB | - |
| N4680_RS02995 (613625) | 613625..613843 | - | 219 | WP_171866797.1 | transcriptional activator TdcR | - |
| N4680_RS03000 (614159) | 614159..615097 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| N4680_RS03005 (615196) | 615196..616185 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| N4680_RS03010 (616207) | 616207..617538 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| N4680_RS03015 (617564) | 617564..618772 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|