NZ_CP1232552413586..2426395

MGE detailed information

MGE type: Genomic_island        MGE length: 12810 bp
Accession: NZ_CP123255        Location: 2413586..2426395         Organism: Escherichia coli strain YZMc17-1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N4680_RS11710 (2413586) 2413586..2413852 + 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
N4680_RS11715 (2413852) 2413852..2415174 + 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
N4680_RS11720 (2415486) 2415486..2415694 + 209 Protein_2293 AraC family transcriptional regulator -
N4680_RS11725 (2415949) 2415949..2417175 + 1227 Protein_2294 Outer membrane usher protein FimD VF
N4680_RS11730 (2417189) 2417189..2417719 + 531 WP_000876763.1 Protein FimF VF
N4680_RS11735 (2417732) 2417732..2418235 + 504 WP_000825452.1 Protein FimG VF
N4680_RS11740 (2418294) 2418294..2419208 + 915 WP_000520662.1 Type 1 fimbrin D-mannose specific adhesin VF
N4680_RS11745 (2419542) 2419542..2421821 + 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
N4680_RS11750 (2422069) 2422069..2422266 + 198 WP_000543384.1 two-component system connector SafA -
N4680_RS11755 (2422341) 2422341..2423102 + 762 WP_072646387.1 acid stress response transcriptional regulator YdeO -
N4680_RS11760 (2423504) 2423504..2425186 + 1683 WP_001295684.1 sulfatase -
N4680_RS11765 (2425238) 2425238..2426395 + 1158 WP_001301030.1 anaerobic sulfatase maturase -
N4680_RS11770 (2426361) 2426361..2426483 - 123 WP_120795387.1 protein YneP -
N4680_RS11775 (2426686) 2426686..2428371 + 1686 WP_000628576.1 ABC transporter ATP-binding protein/permease -
N4680_RS11780 (2428409) 2428409..2430781 + 2373 WP_000832437.1 TonB-dependent receptor plug domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.004
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.004
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.004
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.004
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.005
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.006
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.004
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.004
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.004
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.004
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.004
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.004
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.004