MGE detailed information
MGE type: Genomic_island MGE length: 29743 bp
Accession: NZ_CP123240 Location: 4423101..4452843 Organism: Escherichia coli strain YZLc1-3 Replicon: chromosome
Accession: NZ_CP123240 Location: 4423101..4452843 Organism: Escherichia coli strain YZLc1-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4725_RS21460 (4418559) | 4418559..4419674 | - | 1116 | WP_001022015.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| N4725_RS21465 (4419684) | 4419684..4420943 | - | 1260 | WP_000132325.1 | S-methyl-5-thioribose kinase | - |
| N4725_RS21470 (4421743) | 4421743..4422680 | + | 938 | Protein_4202 | glycosyltransferase | - |
| N4725_RS21475 (4423101) | 4423101..4425176 | + | 2076 | WP_000366620.1 | AAA family ATPase | - |
| N4725_RS21480 (4425169) | 4425169..4426455 | + | 1287 | WP_000504875.1 | McrC family protein | - |
| N4725_RS21485 (4426565) | 4426565..4428304 | + | 1740 | WP_000781649.1 | Alw26I/Eco31I/Esp3I family type II restriction endonuclease | - |
| N4725_RS21490 (4428317) | 4428317..4429507 | - | 1191 | WP_001295727.1 | DNA (cytosine-5-)-methyltransferase | - |
| N4725_RS21495 (4429500) | 4429500..4431122 | - | 1623 | WP_001295726.1 | Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase | - |
| N4725_RS21500 (4431355) | 4431355..4431582 | - | 228 | WP_024183600.1 | IS3 family transposase ISSen1 | Transposase |
| N4725_RS21505 (4431846) | 4431846..4432022 | - | 177 | Protein_4209 | IS3 family transposase ISSen1 | Transposase |
| N4725_RS21510 (4432389) | 4432389..4432532 | - | 144 | Protein_4210 | hypothetical protein | - |
| N4725_RS21515 (4432617) | 4432617..4432814 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| N4725_RS21520 (4432834) | 4432834..4433322 | - | 489 | WP_000761685.1 | DUF5983 family protein | - |
| N4725_RS21525 (4433319) | 4433319..4433696 | - | 378 | WP_072649755.1 | TA system toxin CbtA family protein | Toxin Detail |
| N4725_RS21530 (4433786) | 4433786..4434154 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N4725_RS21535 (4434234) | 4434234..4434455 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| N4725_RS21540 (4434542) | 4434542..4435018 | - | 477 | WP_001384029.1 | RadC family protein | - |
| N4725_RS21545 (4435033) | 4435033..4435518 | - | 486 | WP_000213722.1 | antirestriction protein | - |
| N4725_RS21550 (4435610) | 4435610..4436428 | - | 819 | WP_001175175.1 | DUF932 domain-containing protein | - |
| N4725_RS21555 (4436518) | 4436518..4436727 | - | 210 | WP_032150870.1 | DUF905 family protein | - |
| N4725_RS21560 (4436757) | 4436757..4437434 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| N4725_RS21565 (4437582) | 4437582..4438262 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| N4725_RS21570 (4438465) | 4438465..4439349 | - | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| N4725_RS21575 (4439534) | 4439534..4440664 | + | 1131 | WP_072660960.1 | hypothetical protein | - |
| N4725_RS21580 (4442145) | 4442145..4442876 | + | 732 | WP_001075464.1 | inovirus Gp2 family protein | - |
| N4725_RS21585 (4443204) | 4443204..4444082 | + | 879 | WP_262934559.1 | restriction endonuclease | - |
| N4725_RS21590 (4444136) | 4444136..4444710 | + | 575 | Protein_4226 | transposase | - |
| N4725_RS21595 (4444843) | 4444843..4445618 | - | 776 | Protein_4227 | transposase | - |
| N4725_RS21600 (4445839) | 4445839..4446279 | + | 441 | WP_000038139.1 | H-NS histone family protein | - |
| N4725_RS21605 (4446548) | 4446548..4446676 | + | 129 | Protein_4229 | IS256 family transposase | - |
| N4725_RS21610 (4446706) | 4446706..4447055 | - | 350 | Protein_4230 | IS21 family transposase | - |
| N4725_RS21615 (4448088) | 4448088..4448654 | + | 567 | WP_001126807.1 | inovirus-type Gp2 protein | - |
| N4725_RS21620 (4448902) | 4448902..4449474 | + | 573 | WP_123004690.1 | hypothetical protein | - |
| N4725_RS21625 (4449543) | 4449543..4449776 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| N4725_RS21630 (4450059) | 4450059..4450607 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| N4725_RS21635 (4450626) | 4450626..4450874 | - | 249 | WP_001470076.1 | ProQ/FINO family protein | - |
| N4725_RS21640 (4450997) | 4450997..4452074 | - | 1078 | Protein_4236 | IS3 family transposase IS2 | Transposase |
| N4725_RS21645 (4452852) | 4452852..4453007 | - | 156 | WP_232380132.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| N4725_RS21650 (4453208) | 4453208..4454524 | + | 1317 | WP_000803221.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| N4725_RS21655 (4454663) | 4454663..4455660 | + | 998 | Protein_4239 | IS110 family transposase | - |
| N4725_RS21660 (4456019) | 4456019..4457362 | + | 1344 | WP_029397907.1 | esterase-like activity of phytase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|