MGE detailed information
MGE type: Prophage MGE length: 23422 bp
Accession: NZ_CP123240 Location: 2284625..2308046 Organism: Escherichia coli strain YZLc1-3 Replicon: chromosome
Accession: NZ_CP123240 Location: 2284625..2308046 Organism: Escherichia coli strain YZLc1-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4725_RS11155 () | 2280754..2281395 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| N4725_RS11160 () | 2281450..2282628 | - | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| N4725_RS11165 () | 2282762..2283052 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| N4725_RS11170 () | 2283119..2283475 | + | 357 | WP_001295500.1 | protein YebF | - |
| N4725_RS11175 () | 2283802..2284461 | + | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| N4725_RS11180 () | 2284625..2285794 | - | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| N4725_RS11185 () | 2285851..2286276 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| N4725_RS11190 () | 2286433..2288493 | + | 2061 | WP_106475173.1 | oligopeptidase B | - |
| N4725_RS11195 () | 2288490..2289152 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| N4725_RS11200 () | 2289176..2289832 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein YobB | - |
| N4725_RS11205 () | 2289934..2290164 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| N4725_RS11210 () | 2290303..2290677 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| N4725_RS11215 () | 2290681..2291553 | + | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| N4725_RS11220 () | 2291566..2291907 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 2291935..2292206 | - | 272 | - | - | Antitoxin Detail |
| - | 2292065..2292168 | + | 104 | - | - | Toxin Detail |
| N4725_RS11225 () | 2292303..2292959 | + | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| N4725_RS11230 () | 2292960..2293151 | - | 192 | WP_001296140.1 | YebW family protein | - |
| N4725_RS11235 () | 2293256..2293492 | - | 237 | WP_001295499.1 | YebV family protein | - |
| N4725_RS11240 () | 2293610..2295049 | - | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| N4725_RS11245 () | 2295129..2297762 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| N4725_RS11250 () | 2297731..2299014 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| N4725_RS11255 () | 2299144..2299641 | + | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| N4725_RS11260 () | 2299738..2300436 | + | 699 | WP_001595843.1 | RNA chaperone ProQ | - |
| N4725_RS11265 () | 2300456..2302504 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| N4725_RS11270 () | 2302696..2303577 | + | 882 | WP_000984517.1 | protease HtpX | - |
| N4725_RS11275 () | 2303623..2304996 | - | 1374 | WP_001328842.1 | MFS transporter | - |
| N4725_RS11280 () | 2305173..2305964 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| N4725_RS11285 () | 2306108..2306347 | - | 240 | WP_001211011.1 | YobH family protein | - |
| N4725_RS11290 () | 2306506..2306649 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| N4725_RS11295 () | 2306724..2307011 | + | 288 | WP_001006855.1 | YebO family protein | - |
| N4725_RS11300 () | 2307681..2307824 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| N4725_RS11305 () | 2307837..2308046 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| N4725_RS11310 () | 2308212..2309021 | + | 810 | WP_000010120.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| N4725_RS11315 () | 2309018..2309584 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| N4725_RS11320 () | 2310013..2310471 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| N4725_RS11325 () | 2310527..2311378 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| N4725_RS11330 () | 2311391..2312191 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|