MGE detailed information
MGE type: Prophage MGE length: 53887 bp
Accession: NZ_CP123237 Location: 3704562..3758448 Organism: Escherichia coli strain 4588 Replicon: chromosome
Accession: NZ_CP123237 Location: 3704562..3758448 Organism: Escherichia coli strain 4588 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QET42_RS18275 (3700080) | 3700080..3700538 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| QET42_RS18280 (3700799) | 3700799..3702256 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| QET42_RS18285 (3702313) | 3702313..3702834 | - | 522 | Protein_3578 | peptide chain release factor H | - |
| QET42_RS18290 (3702830) | 3702830..3703036 | - | 207 | Protein_3579 | RtcB family protein | - |
| QET42_RS18295 (3703354) | 3703354..3703806 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| QET42_RS18300 (3703816) | 3703816..3704214 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | - |
| QET42_RS18305 (3704217) | 3704217..3704510 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | - |
| QET42_RS18310 (3704562) | 3704562..3705617 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| QET42_RS18315 (3705688) | 3705688..3706473 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| QET42_RS18320 (3706445) | 3706445..3708157 | + | 1713 | Protein_3585 | hypothetical protein | VF |
| QET42_RS18325 (3708381) | 3708381..3708878 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| QET42_RS18330 (3709054) | 3709054..3709803 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| QET42_RS18335 (3710013) | 3710013..3710273 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| QET42_RS18340 (3710276) | 3710276..3710554 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| QET42_RS18345 (3710710) | 3710710..3711450 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QET42_RS18350 (3711421) | 3711421..3712188 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| QET42_RS18355 (3712394) | 3712394..3712972 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| QET42_RS18360 (3713212) | 3713212..3715656 | + | 2445 | WP_000973083.1 | hypothetical protein | VF |
| QET42_RS18365 (3715699) | 3715699..3716145 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| QET42_RS18370 (3716326) | 3716326..3717096 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| QET42_RS18375 (3717137) | 3717137..3718273 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| QET42_RS18380 (3718704) | 3718704..3719096 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| QET42_RS18385 (3719074) | 3719074..3722214 | - | 3141 | WP_166509038.1 | hypothetical protein | VF |
| QET42_RS18390 (3722254) | 3722254..3722391 | - | 138 | WP_001297813.1 | hypothetical protein | - |
| QET42_RS18395 (3722424) | 3722424..3722942 | - | 519 | WP_001142958.1 | hypothetical protein | VF |
| QET42_RS18400 (3723637) | 3723637..3724137 | + | 501 | WP_000037397.1 | hypothetical protein | VF |
| QET42_RS18405 (3724172) | 3724172..3724396 | + | 225 | WP_000123970.1 | hypothetical protein | - |
| QET42_RS18410 (3724447) | 3724447..3725316 | + | 870 | Protein_3603 | hypothetical protein | VF |
| QET42_RS18415 (3725374) | 3725374..3726071 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| QET42_RS18420 (3726083) | 3726083..3726238 | - | 156 | Protein_3605 | hypothetical protein | - |
| QET42_RS18430 (3726775) | 3726775..3727506 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| QET42_RS18435 (3727571) | 3727571..3728038 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| QET42_RS18440 (3728035) | 3728035..3728757 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| QET42_RS18445 (3728791) | 3728791..3729546 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| QET42_RS18450 (3729618) | 3729618..3730976 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| QET42_RS18455 (3731024) | 3731024..3731620 | - | 597 | Protein_3611 | methyltransferase domain-containing protein | - |
| QET42_RS18460 (3731651) | 3731651..3732451 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| QET42_RS18465 (3732692) | 3732692..3733606 | + | 915 | WP_000648572.1 | hypothetical protein | VF |
| QET42_RS18470 (3733603) | 3733603..3734406 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
| QET42_RS18505 (3740166) | 3740166..3740741 | - | 576 | WP_001140187.1 | hypothetical protein | VF |
| QET42_RS18510 (3740929) | 3740929..3741960 | + | 1032 | WP_000594006.1 | hypothetical protein | VF |
| QET42_RS18515 (3741953) | 3741953..3742606 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| QET42_RS18520 (3742646) | 3742646..3743461 | + | 816 | WP_000874226.1 | hypothetical protein | VF |
| QET42_RS18525 (3743579) | 3743579..3743983 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| QET42_RS18530 (3743980) | 3743980..3744687 | + | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| QET42_RS18535 (3744799) | 3744799..3746517 | + | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
| QET42_RS18540 (3746571) | 3746571..3747395 | + | 825 | WP_001336393.1 | YaeF family permuted papain-like enzyme | - |
| QET42_RS18545 (3747595) | 3747595..3748305 | - | 711 | WP_000239163.1 | envelope stress response activation lipoprotein NlpE | - |
| QET42_RS18550 (3748319) | 3748319..3748741 | - | 423 | WP_000635537.1 | alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB | - |
| QET42_RS18555 (3748738) | 3748738..3749283 | - | 546 | WP_001185290.1 | YaeQ family protein | - |
| QET42_RS18560 (3749449) | 3749449..3749649 | + | 201 | WP_000417058.1 | YaeP family protein | - |
| QET42_RS18565 (3749636) | 3749636..3749896 | + | 261 | WP_000062312.1 | Rho-binding antiterminator | - |
| QET42_RS18570 (3749945) | 3749945..3751243 | - | 1299 | WP_000176549.1 | tRNA lysidine(34) synthetase TilS | - |
| QET42_RS18575 (3751308) | 3751308..3751697 | - | 390 | WP_000901099.1 | VOC family protein | - |
| QET42_RS18580 (3751754) | 3751754..3753895 | - | 2142 | WP_001020973.1 | lysine decarboxylase LdcC | - |
| QET42_RS18585 (3753994) | 3753994..3754953 | - | 960 | WP_000055741.1 | acetyl-CoA carboxylase carboxyl transferase subunit alpha | - |
| QET42_RS18590 (3754966) | 3754966..3758448 | - | 3483 | WP_001294757.1 | DNA polymerase III subunit alpha | - |
| QET42_RS18595 (3758485) | 3758485..3759081 | - | 597 | WP_000569432.1 | ribonuclease HII | - |
| QET42_RS18600 (3759078) | 3759078..3760226 | - | 1149 | WP_000139654.1 | lipid-A-disaccharide synthase | - |
| QET42_RS18605 (3760226) | 3760226..3761014 | - | 789 | WP_000565966.1 | acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase | - |
| QET42_RS18610 (3761018) | 3761018..3761473 | - | 456 | WP_000210739.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| QET42_RS18615 (3761578) | 3761578..3762603 | - | 1026 | WP_001139279.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
| QET42_RS18620 (3762607) | 3762607..3763092 | - | 486 | WP_000758956.1 | molecular chaperone Skp | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|