MGE detailed information
MGE type: Conjugative plasmid MGE length: 91437 bp
Accession: NZ_CP123232 Location: 1..91437 Organism: Escherichia coli strain 5132 Replicon: plasmid pMB11100_1
Accession: NZ_CP123232 Location: 1..91437 Organism: Escherichia coli strain 5132 Replicon: plasmid pMB11100_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QET41_RS24295 (46) | 46..1077 | + | 1032 | WP_000907867.1 | plasmid replication initiator RepA | - |
| QET41_RS24300 (2146) | 2146..2655 | - | 510 | WP_000045394.1 | hypothetical protein | - |
| QET41_RS24305 (2711) | 2711..3313 | - | 603 | WP_000517692.1 | ProQ/FINO family protein | - |
| QET41_RS24310 (3667) | 3667..5013 | + | 1347 | WP_001132033.1 | protein YagA | - |
| QET41_RS24315 (5292) | 5292..5549 | + | 258 | Protein_4 | hypothetical protein | - |
| QET41_RS24320 (5611) | 5611..6234 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| QET41_RS24325 (6316) | 6316..7521 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| QET41_RS24330 (7634) | 7634..8227 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| QET41_RS24335 (8315) | 8315..8731 | + | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| QET41_RS24340 (8741) | 8741..9949 | - | 1209 | WP_001672033.1 | IS4 family transposase IS10R | Transposase |
| QET41_RS24345 (10125) | 10125..11690 | + | 1566 | WP_223174983.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QET41_RS24350 (11708) | 11708..12055 | - | 348 | WP_000762579.1 | colicin E1 family microcin immunity protein | - |
| QET41_RS24355 (12174) | 12174..12521 | + | 348 | WP_000142459.1 | DUF6404 family protein | - |
| QET41_RS24360 (12539) | 12539..13129 | - | 591 | WP_000194571.1 | hypothetical protein | - |
| QET41_RS24365 (13126) | 13126..13386 | - | 261 | WP_000371890.1 | hypothetical protein | - |
| QET41_RS24370 (14323) | 14323..15033 | + | 711 | WP_001286261.1 | hypothetical protein | - |
| QET41_RS24375 (15046) | 15046..15828 | + | 783 | WP_023972589.1 | site-specific integrase | - |
| QET41_RS24380 (15966) | 15966..16241 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| QET41_RS24385 (16235) | 16235..16879 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| QET41_RS24390 (17108) | 17108..18079 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| QET41_RS24395 (18084) | 18084..18476 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| QET41_RS24400 (18481) | 18481..19752 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| QET41_RS24405 (19752) | 19752..20189 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QET41_RS24410 (20186) | 20186..20434 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QET41_RS24415 (20852) | 20852..21754 | + | 903 | WP_052892454.1 | DUF1281 domain-containing protein | - |
| QET41_RS24420 (21751) | 21751..22062 | + | 312 | WP_072127363.1 | hypothetical protein | - |
| QET41_RS24425 (22138) | 22138..22821 | + | 684 | WP_000085874.1 | DNA methylase | - |
| QET41_RS24430 (22822) | 22822..23043 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| QET41_RS24435 (23024) | 23024..23490 | + | 467 | Protein_28 | DUF1380 family protein | - |
| QET41_RS24440 (23541) | 23541..24317 | + | 777 | WP_024135769.1 | hypothetical protein | - |
| QET41_RS24445 (24731) | 24731..25156 | + | 426 | WP_001198939.1 | antirestriction protein | - |
| QET41_RS24450 (25203) | 25203..25625 | + | 423 | WP_000271694.1 | DUF1380 family protein | - |
| QET41_RS24455 (25622) | 25622..25813 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QET41_RS24460 (25884) | 25884..26198 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| QET41_RS24465 (26582) | 26582..27109 | + | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| QET41_RS24470 (27166) | 27166..27399 | + | 234 | WP_001042948.1 | DUF905 domain-containing protein | - |
| QET41_RS24475 (27461) | 27461..29419 | + | 1959 | WP_058683824.1 | ParB/RepB/Spo0J family partition protein | - |
| QET41_RS24480 (29474) | 29474..29908 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QET41_RS24485 (29905) | 29905..30624 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QET41_RS24490 (30621) | 30621..31217 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| QET41_RS24495 (31680) | 31680..32180 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| QET41_RS24500 (32909) | 32909..33343 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QET41_RS24505 (33437) | 33437..33703 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QET41_RS24510 (33768) | 33768..34706 | + | 939 | WP_001672076.1 | Recombination-promoting nuclease RpnA | VF |
| QET41_RS24515 (34729) | 34729..34926 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| QET41_RS24520 (34957) | 34957..35208 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QET41_RS24525 (35788) | 35788..36636 | + | 849 | WP_001077024.1 | DUF4942 domain-containing protein | - |
| QET41_RS24530 (36723) | 36723..37058 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QET41_RS24535 (37292) | 37292..37624 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QET41_RS24540 (37635) | 37635..40334 | + | 2700 | WP_001405892.1 | Protein TraI | Relaxase |
| QET41_RS24545 (40371) | 40371..42662 | - | 2292 | WP_001289282.1 | F-type conjugative transfer protein TrbC | - |
| QET41_RS24550 (42655) | 42655..43725 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| QET41_RS24555 (43744) | 43744..44952 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (45132) | 45132..45189 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (45132) | 45132..45189 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (45132) | 45132..45189 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (45132) | 45132..45189 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| QET41_RS24560 (45244) | 45244..45396 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| QET41_RS24565 (45468) | 45468..45719 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| QET41_RS24570 (46218) | 46218..46313 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QET41_RS24575 (46378) | 46378..46554 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| QET41_RS24580 (46946) | 46946..47155 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QET41_RS24585 (47227) | 47227..47877 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QET41_RS24590 (47951) | 47951..50119 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| QET41_RS24595 (50216) | 50216..50800 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QET41_RS24600 (50829) | 50829..52031 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| QET41_RS24605 (51998) | 51998..52612 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QET41_RS24610 (52612) | 52612..55656 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| QET41_RS24615 (55746) | 55746..56546 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QET41_RS24620 (56530) | 56530..56718 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QET41_RS24625 (56782) | 56782..57186 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| QET41_RS24630 (57237) | 57237..57764 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QET41_RS24635 (57764) | 57764..58468 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| QET41_RS24640 (58468) | 58468..59757 | - | 1290 | WP_001272000.1 | conjugal transfer protein TraO | - |
| QET41_RS24645 (59760) | 59760..60743 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| QET41_RS24650 (60754) | 60754..61446 | - | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| QET41_RS24655 (61443) | 61443..61790 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QET41_RS24660 (61808) | 61808..65575 | - | 3768 | WP_001141543.1 | DUF5710 domain-containing protein | - |
| QET41_RS24665 (65665) | 65665..66216 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| QET41_RS24670 (66231) | 66231..66521 | - | 291 | WP_001372180.1 | hypothetical protein | - |
| QET41_RS24675 (66518) | 66518..67666 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QET41_RS24680 (67663) | 67663..68481 | - | 819 | WP_001672079.1 | hypothetical protein | VF |
| QET41_RS24685 (68478) | 68478..68936 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QET41_RS24690 (69331) | 69331..69915 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QET41_RS24695 (69975) | 69975..71177 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QET41_RS24700 (71263) | 71263..72087 | - | 825 | WP_001238929.1 | conjugal transfer protein TraE | - |
| QET41_RS24705 (72238) | 72238..73392 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| QET41_RS24710 (75158) | 75158..76450 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QET41_RS24715 (76450) | 76450..77106 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QET41_RS24720 (77091) | 77091..77651 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QET41_RS24725 (77661) | 77661..78275 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| QET41_RS24730 (78293) | 78293..79390 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QET41_RS24735 (79403) | 79403..80956 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QET41_RS24740 (80967) | 80967..81419 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| QET41_RS24745 (81406) | 81406..82701 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| QET41_RS24750 (82694) | 82694..84376 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| QET41_RS24755 (84390) | 84390..84827 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QET41_RS24760 (84827) | 84827..85894 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| QET41_RS24765 (86518) | 86518..86814 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| QET41_RS24770 (86990) | 86990..87244 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QET41_RS24775 (87406) | 87406..87957 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| QET41_RS24780 (88130) | 88130..88813 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QET41_RS24785 (89067) | 89067..89600 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| QET41_RS24790 (90042) | 90042..90329 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| QET41_RS24795 (90367) | 90367..90525 | - | 159 | Protein_100 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|