MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP123231 Location: 4153353..4172605 Organism: Escherichia coli strain 5132 Replicon: chromosome
Accession: NZ_CP123231 Location: 4153353..4172605 Organism: Escherichia coli strain 5132 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QET41_RS20230 (4148832) | 4148832..4149335 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| QET41_RS20235 (4149348) | 4149348..4149878 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| QET41_RS20240 (4149888) | 4149888..4152524 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| QET41_RS20245 (4152591) | 4152591..4153316 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| QET41_RS20250 (4153353) | 4153353..4153892 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| QET41_RS20255 (4153957) | 4153957..4154505 | - | 549 | WP_001774144.1 | Type-1 fimbrial protein, A chain | VF |
| QET41_RS20260 (4154987) | 4154987..4155583 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| QET41_RS20265 (4156061) | 4156061..4156663 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| QET41_RS20270 (4158119) | 4158119..4158835 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QET41_RS20275 (4158855) | 4158855..4159961 | + | 1107 | WP_001774143.1 | N-acetylneuraminate epimerase | - |
| QET41_RS20280 (4160026) | 4160026..4161006 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| QET41_RS20285 (4161116) | 4161116..4161321 | + | 206 | Protein_3971 | HNH endonuclease | - |
| QET41_RS20290 (4161589) | 4161589..4162829 | - | 1241 | Protein_3972 | helicase YjhR | - |
| QET41_RS20295 (4162945) | 4162945..4163076 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| QET41_RS20300 (4163567) | 4163567..4163824 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| QET41_RS20305 (4163836) | 4163836..4164381 | + | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| QET41_RS20310 (4164437) | 4164437..4165183 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| QET41_RS20315 (4165352) | 4165352..4165570 | + | 219 | Protein_3977 | hypothetical protein | - |
| QET41_RS20320 (4165608) | 4165608..4165724 | + | 117 | Protein_3978 | VOC family protein | - |
| QET41_RS20325 (4165969) | 4165969..4167090 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| QET41_RS20330 (4167087) | 4167087..4167365 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| QET41_RS20335 (4167377) | 4167377..4168690 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| QET41_RS20340 (4168703) | 4168703..4169509 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| QET41_RS20345 (4169640) | 4169640..4170071 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| QET41_RS20350 (4170083) | 4170083..4170715 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| QET41_RS20355 (4170732) | 4170732..4171514 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| QET41_RS20360 (4171817) | 4171817..4172605 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| QET41_RS20365 (4172610) | 4172610..4173515 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| QET41_RS20370 (4173526) | 4173526..4175493 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| QET41_RS20375 (4175600) | 4175600..4176949 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|