MGE detailed information
MGE type: Prophage MGE length: 30786 bp
Accession: NZ_CP123197 Location: 3885451..3916236 Organism: Escherichia coli strain C-SRM-3 Replicon: chromosome
Accession: NZ_CP123197 Location: 3885451..3916236 Organism: Escherichia coli strain C-SRM-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PAE60_RS20055 (3881302) | 3881302..3882717 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| PAE60_RS20060 (3882800) | 3882800..3883783 | + | 984 | WP_000235522.1 | quinone oxidoreductase | - |
| PAE60_RS20065 (3883949) | 3883949..3884191 | - | 243 | WP_000891389.1 | envelope stress response protein PspG | - |
| PAE60_RS20070 (3884325) | 3884325..3885362 | - | 1038 | WP_000543841.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| PAE60_RS20075 (3885451) | 3885451..3886548 | + | 1098 | WP_000332259.1 | hypothetical protein ; Integrase | Integrase |
| PAE60_RS20080 (3886609) | 3886609..3886857 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| PAE60_RS20085 (3887080) | 3887080..3887631 | + | 552 | WP_000543834.1 | SLATT domain-containing protein | - |
| PAE60_RS20090 (3887609) | 3887609..3888979 | + | 1371 | WP_001678535.1 | reverse transcriptase domain-containing protein | - |
| PAE60_RS20095 (3889087) | 3889087..3889374 | - | 288 | Protein_3702 | hypothetical protein | - |
| PAE60_RS20100 (3889417) | 3889417..3891570 | - | 2154 | WP_001753753.1 | pyocin knob domain-containing S74 family peptidase | - |
| PAE60_RS20105 (3891797) | 3891797..3891982 | - | 186 | WP_234284556.1 | hypothetical protein | - |
| PAE60_RS20110 (3891979) | 3891979..3894081 | - | 2103 | WP_000934105.1 | phage terminase large subunit family protein | - |
| PAE60_RS20115 (3894081) | 3894081..3894572 | - | 492 | WP_000349509.1 | DUF1441 family protein | - |
| PAE60_RS20120 (3895251) | 3895251..3895490 | - | 240 | WP_046657214.1 | hypothetical protein | - |
| PAE60_RS20125 (3895537) | 3895537..3895998 | - | 462 | WP_046657216.1 | lysis protein | - |
| PAE60_RS20130 (3895995) | 3895995..3896492 | - | 498 | WP_046657217.1 | lysozyme RrrD | - |
| PAE60_RS20135 (3896492) | 3896492..3896707 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| PAE60_RS20140 (3896775) | 3896775..3897827 | - | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| PAE60_RS20145 (3897977) | 3897977..3898171 | - | 195 | WP_001355891.1 | hypothetical protein | - |
| PAE60_RS20150 (3898395) | 3898395..3898820 | - | 426 | WP_000217632.1 | hypothetical protein | - |
| PAE60_RS20155 (3899101) | 3899101..3899852 | - | 752 | Protein_3714 | antitermination protein | - |
| PAE60_RS20160 (3899866) | 3899866..3900855 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| PAE60_RS20165 (3900863) | 3900863..3901660 | - | 798 | WP_001061404.1 | KilA-N domain-containing protein | - |
| PAE60_RS20170 (3901680) | 3901680..3902069 | - | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PAE60_RS20175 (3902066) | 3902066..3902392 | - | 327 | WP_032235543.1 | LexA family transcriptional regulator | - |
| PAE60_RS20180 (3902389) | 3902389..3903042 | - | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| PAE60_RS20185 (3903042) | 3903042..3903536 | - | 495 | WP_072165319.1 | PerC family transcriptional regulator | - |
| PAE60_RS20190 (3903533) | 3903533..3904351 | - | 819 | WP_021527492.1 | helix-turn-helix domain-containing protein | - |
| PAE60_RS20195 (3904348) | 3904348..3904584 | - | 237 | WP_000933942.1 | hypothetical protein | - |
| PAE60_RS20200 (3904577) | 3904577..3905014 | - | 438 | WP_229021219.1 | ash family protein | - |
| PAE60_RS20205 (3905085) | 3905085..3905264 | - | 180 | WP_001341559.1 | DUF4222 domain-containing protein | - |
| PAE60_RS20210 (3905410) | 3905410..3905961 | - | 552 | WP_000515860.1 | protein YmfL | - |
| PAE60_RS20215 (3906005) | 3906005..3906205 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| PAE60_RS20220 (3906296) | 3906296..3906970 | + | 675 | WP_000859462.1 | LexA family transcriptional repressor | - |
| PAE60_RS20225 (3907637) | 3907637..3907999 | + | 363 | WP_000135682.1 | protein YfdP | - |
| PAE60_RS20230 (3908065) | 3908065..3908889 | + | 825 | WP_001753751.1 | DUF2303 family protein | - |
| PAE60_RS20235 (3909076) | 3909076..3909858 | + | 783 | WP_000610754.1 | hypothetical protein | - |
| PAE60_RS20240 (3909895) | 3909895..3910164 | + | 270 | WP_001093912.1 | pyocin activator PrtN family protein | - |
| PAE60_RS20245 (3910198) | 3910198..3910746 | - | 549 | WP_000019186.1 | hypothetical protein | Toxin Detail |
| PAE60_RS20250 (3910769) | 3910769..3911242 | - | 474 | WP_000287252.1 | DUF4065 domain-containing protein | Antitoxin Detail |
| PAE60_RS20255 (3911547) | 3911547..3911651 | - | 105 | Protein_3734 | tRNA-dihydrouridine synthase | - |
| PAE60_RS20260 (3912014) | 3912014..3912754 | - | 741 | WP_001324389.1 | DUF2713 family protein | - |
| PAE60_RS20265 (3912749) | 3912749..3913030 | - | 282 | Protein_3736 | DUF2713 domain-containing protein | - |
| PAE60_RS20270 (3913348) | 3913348..3913863 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| PAE60_RS20275 (3913905) | 3913905..3914114 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| PAE60_RS20280 (3914230) | 3914230..3915555 | - | 1326 | WP_001301116.1 | MATE family efflux transporter DinF | - |
| PAE60_RS20285 (3915628) | 3915628..3916236 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| PAE60_RS20290 (3916346) | 3916346..3916714 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| PAE60_RS20295 (3916885) | 3916885..3919308 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| PAE60_RS20300 (3919463) | 3919463..3920335 | - | 873 | WP_000455228.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| PAE60_RS20305 (3920348) | 3920348..3920845 | - | 498 | WP_001297295.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|