MGE detailed information
MGE type: IS/Tn MGE length: 1209 bp
Accession: NZ_CP123047 Location: 58018..59226 Organism: Escherichia coli strain EC0430 Replicon: plasmid pEC0430-1
Accession: NZ_CP123047 Location: 58018..59226 Organism: Escherichia coli strain EC0430 Replicon: plasmid pEC0430-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDU34_RS23425 (53048) | 53048..53161 | + | 114 | Protein_44 | DUF5431 family protein | - |
| QDU34_RS23430 (53106) | 53106..53228 | + | 123 | WP_223195199.1 | Hok/Gef family protein | Toxin Detail |
| QDU34_RS23435 (53529) | 53529..53850 | - | 322 | Protein_46 | hypothetical protein | - |
| QDU34_RS23440 (53852) | 53852..54139 | + | 288 | WP_000107544.1 | hypothetical protein | - |
| QDU34_RS23445 (54257) | 54257..55078 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| QDU34_RS23450 (55375) | 55375..56022 | - | 648 | WP_001825185.1 | transglycosylase SLT domain-containing protein | - |
| QDU34_RS23455 (56299) | 56299..56682 | + | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDU34_RS23460 (56873) | 56873..57559 | + | 687 | WP_001825184.1 | PAS domain-containing protein | - |
| QDU34_RS23465 (57653) | 57653..57880 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| QDU34_RS23470 (57914) | 57914..58003 | + | 90 | Protein_53 | type IV conjugative transfer system pilin TraA | - |
| QDU34_RS23475 (58018) | 58018..59226 | - | 1209 | WP_001352368.1 | IS4-like element ISVsa5 family transposase | - |
| QDU34_RS23480 (59330) | 59330..59617 | + | 288 | Protein_55 | type IV conjugative transfer system pilin TraA | - |
| QDU34_RS23485 (59632) | 59632..59943 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QDU34_RS23490 (59965) | 59965..60531 | + | 567 | WP_000399774.1 | type IV conjugative transfer system protein TraE | - |
| QDU34_RS23495 (60518) | 60518..61246 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QDU34_RS23500 (61246) | 61246..62673 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDU34_RS23505 (62663) | 62663..63253 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QDU34_RS23510 (63240) | 63240..63437 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| QDU34_RS23515 (63449) | 63449..63700 | + | 252 | WP_001038351.1 | conjugal transfer protein TrbG | - |
| QDU34_RS23520 (63697) | 63697..64212 | + | 516 | WP_000809834.1 | type IV conjugative transfer system lipoprotein TraV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|