MGE detailed information
MGE type: Prophage MGE length: 59023 bp
Accession: NZ_CP123024 Location: 2058753..2117775 Organism: Escherichia coli strain 20-16 Replicon: chromosome
Accession: NZ_CP123024 Location: 2058753..2117775 Organism: Escherichia coli strain 20-16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEN53_RS09935 () | 2055171..2056142 | - | 972 | WP_000564745.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| QEN53_RS09940 () | 2056139..2056882 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| QEN53_RS09945 () | 2056923..2057318 | - | 396 | WP_001356287.1 | MAPEG family protein | - |
| QEN53_RS09950 () | 2057371..2057718 | - | 348 | Protein_1943 | DUF72 domain-containing protein | - |
| QEN53_RS09955 () | 2058753..2059277 | - | 525 | WP_000258747.1 | AP2/ERF family transcription factor | - |
| QEN53_RS09960 () | 2060854..2061411 | + | 558 | WP_023147813.1 | hypothetical protein | - |
| QEN53_RS09965 () | 2061412..2061690 | + | 279 | WP_001753400.1 | hypothetical protein | - |
| QEN53_RS09970 () | 2061690..2061905 | + | 216 | WP_001681135.1 | hypothetical protein | - |
| QEN53_RS09975 () | 2061902..2062189 | + | 288 | WP_000805963.1 | HNH endonuclease | - |
| QEN53_RS09980 () | 2062345..2062668 | + | 324 | WP_001678977.1 | hypothetical protein | - |
| QEN53_RS09985 () | 2063207..2063917 | + | 711 | WP_001681134.1 | hypothetical protein | - |
| QEN53_RS09990 () | 2063926..2064234 | + | 309 | WP_001678975.1 | hypothetical protein | - |
| QEN53_RS09995 () | 2064260..2064463 | + | 204 | WP_001678974.1 | hypothetical protein | - |
| QEN53_RS10000 () | 2064622..2066442 | + | 1821 | WP_224289224.1 | tape measure protein | - |
| QEN53_RS10010 () | 2067686..2068006 | + | 321 | Protein_1955 | phage tail tape measure protein | - |
| QEN53_RS10015 () | 2068164..2068937 | + | 774 | WP_001678972.1 | hypothetical protein | - |
| QEN53_RS10020 () | 2069595..2071136 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| QEN53_RS10025 () | 2071151..2071897 | + | 747 | WP_053906593.1 | IS21 family transposase ISEc12 | Transposase |
| QEN53_RS10030 () | 2071982..2073061 | - | 1080 | Protein_1959 | hypothetical protein ; Integrase | Integrase |
| QEN53_RS10035 () | 2073132..2073608 | - | 477 | Protein_1960 | DUF72 domain-containing protein | - |
| QEN53_RS10040 () | 2073605..2074171 | - | 567 | WP_000891618.1 | hydrolase | - |
| QEN53_RS10045 () | 2074481..2076253 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| QEN53_RS10050 () | 2076371..2076823 | + | 453 | WP_001443602.1 | dihydroneopterin triphosphate diphosphatase | - |
| QEN53_RS10055 () | 2076852..2077592 | + | 741 | WP_000907248.1 | putative transcriptional regulatory protein YebC | VF |
| QEN53_RS10060 () | 2077627..2078148 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QEN53_RS10065 () | 2078150..2078752 | - | 603 | WP_001024930.1 | YebB family permuted papain-like enzyme | - |
| QEN53_RS10070 () | 2078823..2078888 | + | 66 | WP_001386853.1 | stress response small protein YobI | - |
| QEN53_RS10075 () | 2079027..2079638 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| QEN53_RS10080 () | 2079647..2080657 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QEN53_RS10085 () | 2080804..2081589 | - | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| QEN53_RS10090 () | 2081586..2082341 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| QEN53_RS10095 () | 2082420..2083352 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QEN53_RS10100 () | 2083368..2084690 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| QEN53_RS10105 () | 2084810..2085781 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QEN53_RS10110 () | 2085912..2087354 | - | 1443 | WP_000091176.1 | pyruvate kinase | - |
| QEN53_RS10115 () | 2087482..2088351 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| QEN53_RS10120 () | 2088689..2090164 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| QEN53_RS10125 () | 2090399..2092210 | + | 1812 | WP_060621242.1 | phosphogluconate dehydratase | - |
| QEN53_RS10130 () | 2092247..2092888 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QEN53_RS10135 () | 2092944..2094122 | - | 1179 | WP_000173475.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QEN53_RS10140 () | 2094256..2094546 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QEN53_RS10145 () | 2094613..2094969 | + | 357 | WP_001295500.1 | protein YebF | - |
| QEN53_RS10150 () | 2095296..2095955 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| QEN53_RS10155 () | 2096164..2098224 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| QEN53_RS10160 () | 2098221..2098883 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QEN53_RS10165 () | 2098907..2099563 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QEN53_RS10170 () | 2099665..2099895 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QEN53_RS10175 () | 2100034..2100408 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| QEN53_RS10180 () | 2100412..2101284 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| QEN53_RS10185 () | 2101297..2101638 | + | 342 | WP_000976492.1 | YebY family protein | - |
| - | 2101666..2101937 | - | 272 | - | - | Antitoxin Detail |
| - | 2101796..2101899 | + | 104 | - | - | Toxin Detail |
| QEN53_RS10190 () | 2102034..2102690 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| QEN53_RS10195 () | 2102691..2102882 | - | 192 | WP_001296140.1 | YebW family protein | - |
| QEN53_RS10200 () | 2102987..2103223 | - | 237 | WP_001295499.1 | YebV family protein | - |
| QEN53_RS10205 () | 2103341..2104780 | - | 1440 | WP_000057023.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QEN53_RS10210 () | 2104860..2107493 | - | 2634 | WP_001356288.1 | Intermembrane transport protein YebT | VF |
| QEN53_RS10215 () | 2107462..2108745 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| QEN53_RS10220 () | 2108875..2109372 | + | 498 | WP_001373833.1 | L-methionine (R)-S-oxide reductase | - |
| QEN53_RS10225 () | 2109469..2110167 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| QEN53_RS10230 () | 2110187..2112235 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| QEN53_RS10235 () | 2112427..2113308 | + | 882 | WP_000984517.1 | protease HtpX | - |
| QEN53_RS10240 () | 2113354..2114727 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| QEN53_RS10245 () | 2114904..2115695 | + | 792 | WP_001262192.1 | DNA-binding transcriptional regulator KdgR | - |
| QEN53_RS10250 () | 2115838..2116077 | - | 240 | WP_001211011.1 | YobH family protein | - |
| QEN53_RS10255 () | 2116236..2116379 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| QEN53_RS10260 () | 2116454..2116741 | + | 288 | WP_001006866.1 | YebO family protein | - |
| QEN53_RS10265 () | 2117410..2117553 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| QEN53_RS10270 () | 2117566..2117775 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| QEN53_RS10275 () | 2117941..2118750 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| QEN53_RS10280 () | 2118747..2119313 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| QEN53_RS10285 () | 2119742..2120200 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| QEN53_RS10290 () | 2120255..2121106 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| QEN53_RS10295 () | 2121119..2121919 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|