MGE detailed information
MGE type: Prophage MGE length: 27524 bp
Accession: NZ_CP123008 Location: 1372098..1399621 Organism: Escherichia coli strain NWU_4 Replicon: chromosome
Accession: NZ_CP123008 Location: 1372098..1399621 Organism: Escherichia coli strain NWU_4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEN27_RS06800 (1368087) | 1368087..1368134 | + | 48 | WP_211180494.1 | protein YnaN | - |
| QEN27_RS06805 (1368148) | 1368148..1369131 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| QEN27_RS06810 (1369406) | 1369406..1369579 | + | 174 | WP_001296046.1 | protein YnaL | - |
| QEN27_RS06815 (1369609) | 1369609..1370982 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| QEN27_RS06820 (1371111) | 1371111..1372046 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| QEN27_RS06825 (1372098) | 1372098..1373333 | - | 1236 | WP_000040852.1 | Protein TolQ ; Integrase | Integrase |
| QEN27_RS06830 (1373335) | 1373335..1373550 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1373654) | 1373654..1373832 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1373654) | 1373654..1373832 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1373654) | 1373654..1373832 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1373654) | 1373654..1373832 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| QEN27_RS06835 (1373650) | 1373650..1373838 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| QEN27_RS06840 (1373831) | 1373831..1374025 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| QEN27_RS06845 (1374081) | 1374081..1374890 | - | 810 | WP_040088925.1 | recombination protein RecT | - |
| QEN27_RS06850 (1374883) | 1374883..1377504 | - | 2622 | WP_278234010.1 | exodeoxyribonuclease VIII | - |
| QEN27_RS06855 (1377606) | 1377606..1377881 | - | 276 | WP_000632297.1 | protein RacC | - |
| QEN27_RS06860 (1377956) | 1377956..1378126 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| QEN27_RS06865 (1378126) | 1378126..1378347 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| QEN27_RS06870 (1378769) | 1378769..1378921 | - | 153 | WP_001551042.1 | DUF1391 family protein | - |
| QEN27_RS06875 (1378932) | 1378932..1379066 | - | 135 | WP_000233807.1 | hypothetical protein | - |
| QEN27_RS06880 (1379354) | 1379354..1379773 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| QEN27_RS06885 (1379853) | 1379853..1380107 | + | 255 | WP_040088921.1 | hypothetical protein | - |
| QEN27_RS06890 (1380104) | 1380104..1380526 | + | 423 | WP_000693802.1 | toxin YdaT family protein | - |
| QEN27_RS06895 (1380539) | 1380539..1381396 | + | 858 | WP_040088920.1 | YdaU family protein | - |
| QEN27_RS06900 (1381403) | 1381403..1382149 | + | 747 | WP_040088918.1 | ATP-binding protein | - |
| QEN27_RS06905 (1382363) | 1382363..1384633 | - | 2271 | WP_047674170.1 | hypothetical protein | - |
| QEN27_RS06910 (1384938) | 1384938..1385510 | + | 573 | Protein_1355 | tRNA (cytidine(34)-2'-O)-methyltransferase ; Integrase | Integrase |
| QEN27_RS06915 (1385742) | 1385742..1386014 | + | 273 | WP_231316995.1 | hypothetical protein | - |
| QEN27_RS06920 (1386060) | 1386060..1387481 | + | 1422 | WP_231316994.1 | LA2681 family HEPN domain-containing protein | - |
| QEN27_RS06925 (1388085) | 1388085..1388240 | + | 156 | WP_175527019.1 | Hok/Gef family protein | - |
| QEN27_RS06930 (1388704) | 1388704..1389303 | + | 600 | WP_000940332.1 | DUF1367 family protein | - |
| QEN27_RS06935 (1389303) | 1389303..1389593 | + | 291 | WP_040088914.1 | DUF1364 domain-containing protein | - |
| QEN27_RS06940 (1389590) | 1389590..1390132 | + | 543 | WP_040088913.1 | DUF1133 family protein | - |
| QEN27_RS06945 (1390362) | 1390362..1391105 | + | 744 | WP_040088912.1 | tRNA-modifying protein YgfZ | VF |
| QEN27_RS06950 (1391299) | 1391299..1392240 | + | 942 | WP_278234011.1 | hypothetical protein | - |
| QEN27_RS06955 (1392240) | 1392240..1392953 | + | 714 | WP_000063620.1 | phage baseplate protein | - |
| QEN27_RS06960 (1393236) | 1393236..1393583 | + | 348 | WP_001261327.1 | hypothetical protein | - |
| QEN27_RS06965 (1393733) | 1393733..1394893 | + | 1161 | WP_000426902.1 | type I restriction endonuclease | - |
| QEN27_RS06970 (1394934) | 1394934..1396160 | + | 1227 | WP_071666102.1 | baseplate J/gp47 family protein | - |
| QEN27_RS06975 (1396144) | 1396144..1396770 | + | 627 | WP_001199730.1 | hypothetical protein | - |
| QEN27_RS06980 (1396767) | 1396767..1398320 | + | 1554 | WP_000600273.1 | hypothetical protein | - |
| QEN27_RS06985 (1398323) | 1398323..1398868 | + | 546 | WP_000902860.1 | tail fiber assembly protein | - |
| QEN27_RS06990 (1398892) | 1398892..1399255 | + | 364 | Protein_1371 | prophage tail fiber N-terminal domain-containing protein | - |
| QEN27_RS06995 (1399232) | 1399232..1399621 | + | 390 | Protein_1372 | DUF4376 domain-containing protein | - |
| QEN27_RS07000 (1399694) | 1399694..1399803 | + | 110 | Protein_1373 | tail fiber assembly protein | - |
| QEN27_RS07005 (1400418) | 1400418..1401785 | + | 1368 | WP_278234012.1 | YadA-like family protein | - |
| QEN27_RS07010 (1402342) | 1402342..1402776 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| QEN27_RS07015 (1402917) | 1402917..1404050 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|