MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 62485 bp
Accession: NZ_CP122989 Location: 1..62485 Organism: Aeromonas salmonicida strain JNG Replicon: plasmid unnamed2
Accession: NZ_CP122989 Location: 1..62485 Organism: Aeromonas salmonicida strain JNG Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDU35_RS23240 (QDU35_23240) | 1..654 | + | 654 | WP_042468169.1 | Surface presentation of antigens protein SpaP | VF |
| QDU35_RS23245 (QDU35_23245) | 656..922 | + | 267 | WP_005320743.1 | hypothetical protein | VF |
| QDU35_RS23250 (QDU35_23250) | 919..1707 | + | 789 | WP_042468170.1 | Surface presentation of antigens protein SpaR | VF |
| QDU35_RS23255 (QDU35_23255) | 1704..2762 | + | 1059 | WP_005320739.1 | Yop proteins translocation protein U | VF |
| QDU35_RS23260 (QDU35_23260) | 2756..3064 | + | 309 | WP_225854518.1 | hypothetical protein | VF |
| QDU35_RS23265 (QDU35_23265) | 3096..3356 | - | 261 | WP_225854519.1 | IS30 family transposase ISAhy3 | Transposase |
| QDU35_RS23270 (QDU35_23270) | 3460..4432 | + | 973 | Protein_7 | IS5 family transposase ISKpn26 | Transposase |
| QDU35_RS23275 (QDU35_23275) | 5388..6248 | + | 861 | WP_011899444.1 | alpha/beta hydrolase | - |
| QDU35_RS23280 (QDU35_23280) | 6765..7682 | - | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| QDU35_RS23285 (QDU35_23285) | 7665..7808 | + | 144 | WP_280101167.1 | hypothetical protein | - |
| QDU35_RS23290 (QDU35_23290) | 8089..8727 | + | 639 | WP_042469195.1 | division plane positioning ATPase MipZ | - |
| QDU35_RS23295 (QDU35_23295) | 8727..9017 | + | 291 | WP_080697445.1 | CopG family transcriptional regulator | - |
| QDU35_RS23300 (QDU35_23300) | 9350..9583 | + | 234 | Protein_13 | hypothetical protein | - |
| QDU35_RS23305 (QDU35_23305) | 9673..10590 | + | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| QDU35_RS23310 (QDU35_23310) | 10809..11528 | - | 720 | WP_042468959.1 | IS21 family transposase ISAs27 | Transposase |
| QDU35_RS23315 (QDU35_23315) | 11554..12228 | - | 675 | Protein_16 | IS21 family transposase ISAs28 | Transposase |
| QDU35_RS23320 (QDU35_23320) | 12263..15291 | - | 3029 | Protein_17 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| QDU35_RS23325 (QDU35_23325) | 15295..15855 | - | 561 | WP_042468955.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| QDU35_RS23330 (QDU35_23330) | 16067..16348 | + | 282 | WP_174416604.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QDU35_RS23335 (QDU35_23335) | 16348..16623 | + | 276 | WP_042468953.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDU35_RS23340 (QDU35_23340) | 17410..18324 | + | 915 | WP_042468951.1 | TOMM precursor leader peptide-binding protein | - |
| QDU35_RS23345 (QDU35_23345) | 18326..18511 | + | 186 | WP_088814096.1 | hypothetical protein | - |
| QDU35_RS23350 (QDU35_23350) | 18560..19477 | + | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| QDU35_RS23355 (QDU35_23355) | 19672..20703 | + | 1032 | WP_088814095.1 | IS630 family transposase ISAhy2 | Transposase |
| QDU35_RS23360 (QDU35_23360) | 20684..20872 | + | 189 | WP_198318209.1 | YcaO-like family protein | - |
| QDU35_RS23365 (QDU35_23365) | 20895..21812 | - | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| QDU35_RS23370 (QDU35_23370) | 22308..22493 | - | 186 | WP_005321183.1 | hypothetical protein | - |
| QDU35_RS23375 (QDU35_23375) | 22623..22775 | - | 153 | WP_043145146.1 | Hok/Gef family protein | - |
| QDU35_RS23380 (QDU35_23380) | 23226..23666 | + | 441 | WP_005321180.1 | hypothetical protein | VF |
| QDU35_RS23385 (QDU35_23385) | 23673..25859 | + | 2187 | WP_005321178.1 | Protein kinase YpkA | VF |
| QDU35_RS23390 (QDU35_23390) | 25870..26235 | - | 366 | Protein_31 | IS630 family transposase ISAeme16 | Transposase |
| QDU35_RS23395 (QDU35_23395) | 26297..27214 | - | 918 | WP_076611341.1 | IS5 family transposase ISAs4 | Transposase |
| QDU35_RS23400 (QDU35_23400) | 27497..28255 | + | 759 | WP_280101168.1 | ABC transporter permease | - |
| QDU35_RS23405 (QDU35_23405) | 28570..28801 | + | 232 | Protein_34 | plasmid replication protein RepB | - |
| QDU35_RS23410 (QDU35_23410) | 28911..29309 | - | 399 | WP_042469126.1 | H-NS family nucleoid-associated regulatory protein | - |
| QDU35_RS23415 (QDU35_23415) | 30032..30865 | - | 834 | WP_280101169.1 | plasmid replication protein repA | - |
| QDU35_RS23420 (QDU35_23420) | 31651..32223 | + | 573 | WP_005321586.1 | AAA family ATPase | - |
| QDU35_RS23425 (QDU35_23425) | 32223..32570 | + | 348 | WP_005321591.1 | hypothetical protein | - |
| QDU35_RS23430 (QDU35_23430) | 32610..33824 | - | 1215 | WP_011898961.1 | IS256 family transposase ISAs3 | Transposase |
| QDU35_RS23435 (QDU35_23435) | 34080..34187 | - | 108 | Protein_40 | IS3 family transposase ISAve4 | Transposase |
| QDU35_RS23440 (QDU35_23440) | 34287..35773 | - | 1487 | Protein_41 | hypothetical protein | VF |
| QDU35_RS23445 (QDU35_23445) | 35817..36266 | - | 450 | WP_005320818.1 | hypothetical protein | VF |
| QDU35_RS23450 (QDU35_23450) | 36466..36744 | + | 279 | Protein_43 | IS5 family transposase ISAs15 | Transposase |
| QDU35_RS23455 (QDU35_23455) | 37040..38068 | - | 1029 | WP_011899437.1 | IS110 family transposase ISAve1 | Transposase |
| QDU35_RS23460 (QDU35_23460) | 38317..38598 | + | 282 | Protein_45 | crossover junction endodeoxyribonuclease RuvC | - |
| QDU35_RS23465 (QDU35_23465) | 38702..39367 | - | 666 | WP_017411843.1 | Yop proteins translocation protein L | VF |
| QDU35_RS23470 (QDU35_23470) | 39346..39972 | - | 627 | WP_042468158.1 | Yop proteins translocation protein K | VF |
| QDU35_RS23475 (QDU35_23475) | 39969..40697 | - | 729 | WP_005320809.1 | Yop proteins translocation lipoprotein J | VF |
| QDU35_RS23480 (QDU35_23480) | 40716..41054 | - | 339 | WP_005320806.1 | Yop proteins translocation protein I | VF |
| QDU35_RS23485 (QDU35_23485) | 41054..41608 | - | 555 | WP_005320804.1 | Yop proteins translocation protein H | VF |
| QDU35_RS23490 (QDU35_23490) | 41605..41958 | - | 354 | WP_005320802.1 | Putative Yop proteins translocation protein G | VF |
| QDU35_RS23495 (QDU35_23495) | 41958..42215 | - | 258 | WP_088814099.1 | Type III export protein PscF | VF |
| QDU35_RS23500 (QDU35_23500) | 42208..42420 | - | 213 | WP_042468160.1 | Type III export protein PscE | VF |
| QDU35_RS23505 (QDU35_23505) | 42383..43687 | - | 1305 | WP_042468161.1 | Yop proteins translocation protein D | VF |
| QDU35_RS23510 (QDU35_23510) | 43684..45537 | - | 1854 | WP_280101165.1 | Yop proteins translocation protein C | VF |
| QDU35_RS23515 (QDU35_23515) | 45510..45935 | - | 426 | WP_017411838.1 | Chaperone protein YscB | VF |
| QDU35_RS23520 (QDU35_23520) | 45951..46766 | - | 816 | WP_017411837.1 | hypothetical protein | VF |
| QDU35_RS23525 (QDU35_23525) | 46886..47701 | - | 816 | WP_042468162.1 | Exoenzyme S synthesis regulatory protein ExsA | VF |
| QDU35_RS23530 (QDU35_23530) | 48047..48448 | - | 402 | WP_042468163.1 | Exoenzyme S synthesis protein B | VF |
| QDU35_RS23535 (QDU35_23535) | 48445..48678 | - | 234 | WP_005320785.1 | hypothetical protein | VF |
| QDU35_RS23540 (QDU35_23540) | 48681..49124 | - | 444 | WP_280101166.1 | Exoenzyme S synthesis protein C | VF |
| QDU35_RS23545 (QDU35_23545) | 49260..50156 | - | 897 | WP_042468164.1 | Protein YopD | VF |
| QDU35_RS23550 (QDU35_23550) | 50169..51362 | - | 1194 | WP_042468165.1 | Protein YopB | VF |
| QDU35_RS23555 (QDU35_23555) | 51310..51846 | - | 537 | WP_042468166.1 | Chaperone protein SicA | VF |
| QDU35_RS23560 (QDU35_23560) | 51856..52941 | - | 1086 | WP_017411832.1 | Virulence-associated V antigen | VF |
| QDU35_RS23565 (QDU35_23565) | 52951..53235 | - | 285 | WP_005320774.1 | hypothetical protein | VF |
| QDU35_RS23570 (QDU35_23570) | 53275..53730 | - | 456 | WP_005320772.1 | hypothetical protein | VF |
| QDU35_RS23575 (QDU35_23575) | 53727..55892 | - | 2166 | WP_269768482.1 | Invasion protein InvA | VF |
| QDU35_RS23580 (QDU35_23580) | 55825..56175 | - | 351 | WP_020379598.1 | Chaperone protein YscY | VF |
| QDU35_RS23585 (QDU35_23585) | 56172..56537 | - | 366 | WP_005320766.1 | Yop proteins translocation protein X | VF |
| QDU35_RS23590 (QDU35_23590) | 56534..56905 | - | 372 | WP_005320764.1 | Chaperone protein SycN | VF |
| QDU35_RS23595 (QDU35_23595) | 56902..57183 | - | 282 | WP_088814098.1 | Protein TyeA | VF |
| QDU35_RS23600 (QDU35_23600) | 57164..58042 | - | 879 | WP_042468168.1 | Outer membrane protein YopN | VF |
| QDU35_RS23605 (QDU35_23605) | 58232..59554 | + | 1323 | WP_005320755.1 | putative ATP synthase YscN | VF |
| QDU35_RS23610 (QDU35_23610) | 59551..60012 | + | 462 | WP_017411827.1 | Yop proteins translocation protein O | VF |
| QDU35_RS23615 (QDU35_23615) | 60019..61566 | + | 1548 | WP_232479354.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|