MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70945 bp
Accession: NZ_CP122988 Location: 1..70945 Organism: Aeromonas salmonicida strain JNG Replicon: plasmid unnamed1
Accession: NZ_CP122988 Location: 1..70945 Organism: Aeromonas salmonicida strain JNG Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDU35_RS22870 (QDU35_22870) | 1..312 | + | 312 | WP_042468251.1 | helix-turn-helix transcriptional regulator | - |
| QDU35_RS22875 (QDU35_22875) | 344..1258 | + | 915 | WP_280101161.1 | reverse transcriptase family protein | - |
| QDU35_RS22880 (QDU35_22880) | 1364..1546 | - | 183 | WP_042468252.1 | hypothetical protein | - |
| QDU35_RS22885 (QDU35_22885) | 1711..1863 | - | 153 | WP_042468253.1 | Hok/Gef family protein | - |
| QDU35_RS22890 (QDU35_22890) | 2371..2868 | - | 498 | WP_042468254.1 | hypothetical protein | - |
| QDU35_RS22895 (QDU35_22895) | 2887..3201 | - | 315 | WP_225854525.1 | hypothetical protein | - |
| QDU35_RS22900 (QDU35_22900) | 3298..4263 | - | 966 | WP_042468256.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QDU35_RS22905 (QDU35_22905) | 4253..4651 | - | 399 | WP_042468273.1 | DUF6088 family protein | Antitoxin Detail |
| QDU35_RS22910 (QDU35_22910) | 5588..6034 | + | 447 | WP_042468257.1 | DNA repair protein RadC | - |
| QDU35_RS22915 (QDU35_22915) | 6074..6436 | + | 363 | WP_042468258.1 | hypothetical protein | - |
| QDU35_RS22920 (QDU35_22920) | 7787..9829 | + | 2043 | WP_052521838.1 | DUF3560 domain-containing protein | - |
| QDU35_RS22925 (QDU35_22925) | 10221..10865 | + | 645 | WP_042468260.1 | DNA methylase | - |
| QDU35_RS22930 (QDU35_22930) | 10910..11119 | + | 210 | WP_225854527.1 | hypothetical protein | - |
| QDU35_RS22935 (QDU35_22935) | 11210..11464 | - | 255 | WP_280101162.1 | hypothetical protein | - |
| QDU35_RS22940 (QDU35_22940) | 11950..12111 | + | 162 | Protein_14 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| QDU35_RS22945 (QDU35_22945) | 12257..13183 | - | 927 | WP_232484100.1 | IS5 family transposase ISKpn26 | Transposase |
| QDU35_RS22950 (QDU35_22950) | 13115..13495 | + | 381 | WP_232484519.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| QDU35_RS22955 (QDU35_22955) | 13546..13908 | + | 363 | WP_042468264.1 | hypothetical protein | - |
| QDU35_RS22960 (QDU35_22960) | 13978..14382 | + | 405 | WP_280101163.1 | antirestriction protein | - |
| QDU35_RS22965 (QDU35_22965) | 14404..14865 | - | 462 | WP_042468277.1 | hypothetical protein | VF |
| QDU35_RS22970 (QDU35_22970) | 15542..15910 | + | 369 | WP_042468267.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDU35_RS22975 (QDU35_22975) | 15962..21091 | - | 5130 | WP_280101164.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDU35_RS22980 (QDU35_22980) | 21091..23268 | - | 2178 | WP_088814093.1 | type IV conjugative transfer system coupling protein TraD | - |
| QDU35_RS22985 (QDU35_22985) | 23327..24061 | - | 735 | WP_042468506.1 | complement resistance protein TraT | - |
| QDU35_RS22990 (QDU35_22990) | 24083..24652 | - | 570 | WP_042468504.1 | hypothetical protein | - |
| QDU35_RS22995 (QDU35_22995) | 24649..27492 | - | 2844 | WP_052521843.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDU35_RS23000 (QDU35_23000) | 27492..28856 | - | 1365 | WP_042468500.1 | conjugal transfer pilus assembly protein TraH | - |
| QDU35_RS23005 (QDU35_23005) | 28843..29379 | - | 537 | WP_042468498.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDU35_RS23010 (QDU35_23010) | 29376..29714 | - | 339 | WP_042468495.1 | hypothetical protein | - |
| QDU35_RS23015 (QDU35_23015) | 29714..30565 | - | 852 | WP_225854522.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDU35_RS23020 (QDU35_23020) | 30562..32415 | - | 1854 | WP_042468494.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDU35_RS23025 (QDU35_23025) | 32412..33047 | - | 636 | WP_042468492.1 | hypothetical protein | - |
| QDU35_RS23030 (QDU35_23030) | 33066..33680 | - | 615 | WP_042468491.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDU35_RS23035 (QDU35_23035) | 33690..34679 | - | 990 | WP_042468488.1 | conjugal transfer pilus assembly protein TraU | - |
| QDU35_RS23040 (QDU35_23040) | 34676..35305 | - | 630 | WP_042468486.1 | type-F conjugative transfer system protein TraW | - |
| QDU35_RS23045 (QDU35_23045) | 35302..35739 | - | 438 | WP_052521841.1 | type-F conjugative transfer system protein TrbI | - |
| QDU35_RS23050 (QDU35_23050) | 35727..38312 | - | 2586 | WP_042468484.1 | type IV secretion system protein TraC | - |
| QDU35_RS23055 (QDU35_23055) | 38323..38874 | - | 552 | WP_042468510.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDU35_RS23060 (QDU35_23060) | 38886..40214 | - | 1329 | WP_042468482.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDU35_RS23065 (QDU35_23065) | 40201..40944 | - | 744 | WP_042468480.1 | type-F conjugative transfer system secretin TraK | - |
| QDU35_RS23070 (QDU35_23070) | 40931..41497 | - | 567 | WP_042468478.1 | type IV conjugative transfer system protein TraE | - |
| QDU35_RS23075 (QDU35_23075) | 41500..41808 | - | 309 | WP_042468477.1 | type IV conjugative transfer system protein TraL | - |
| QDU35_RS23080 (QDU35_23080) | 41823..42134 | - | 312 | WP_042468475.1 | type IV conjugative transfer system pilin TraA | - |
| QDU35_RS23085 (QDU35_23085) | 42224..42427 | - | 204 | WP_043144975.1 | TraY domain-containing protein | - |
| QDU35_RS23090 (QDU35_23090) | 42619..43251 | - | 633 | WP_042468473.1 | LuxR C-terminal-related transcriptional regulator | - |
| QDU35_RS23095 (QDU35_23095) | 43767..44033 | - | 267 | WP_139403084.1 | hypothetical protein | - |
| QDU35_RS23100 (QDU35_23100) | 44206..44763 | - | 558 | WP_042469087.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QDU35_RS23105 (QDU35_23105) | 44757..45131 | - | 375 | WP_042469086.1 | DUF86 domain-containing protein | - |
| QDU35_RS23110 (QDU35_23110) | 45128..45418 | - | 291 | WP_042469085.1 | nucleotidyltransferase family protein | - |
| QDU35_RS23115 (QDU35_23115) | 45579..48545 | + | 2967 | WP_042469084.1 | Tn3 family transposase TnpA_ISSod9 | Transposase |
| QDU35_RS23120 (QDU35_23120) | 48709..49014 | - | 306 | WP_005320934.1 | hypothetical protein | - |
| QDU35_RS23125 (QDU35_23125) | 49014..49643 | - | 630 | WP_042468965.1 | Sporulation initiation inhibitor protein Soj | VF |
| QDU35_RS23130 (QDU35_23130) | 49857..50093 | + | 237 | WP_005320938.1 | hypothetical protein | - |
| QDU35_RS23135 (QDU35_23135) | 50452..51498 | + | 1047 | WP_157669183.1 | plasmid replication protein repA | - |
| QDU35_RS23140 (QDU35_23140) | 52224..52617 | + | 394 | Protein_54 | H-NS family nucleoid-associated regulatory protein | - |
| QDU35_RS23145 (QDU35_23145) | 52727..52975 | - | 249 | WP_005320955.1 | hypothetical protein | - |
| QDU35_RS23150 (QDU35_23150) | 53277..53702 | - | 426 | WP_042468968.1 | hypothetical protein | - |
| QDU35_RS23155 (QDU35_23155) | 53812..54021 | - | 210 | Protein_57 | Tn3 family transposase | - |
| QDU35_RS23160 (QDU35_23160) | 54561..55436 | + | 876 | WP_157668947.1 | hypothetical protein | - |
| QDU35_RS23165 (QDU35_23165) | 55429..55722 | + | 294 | WP_042468970.1 | hypothetical protein | - |
| QDU35_RS23170 (QDU35_23170) | 55848..56162 | + | 315 | WP_080697429.1 | IS3 family transposase ISAs33 | Transposase |
| QDU35_RS23175 (QDU35_23175) | 57117..57118 | - | 2 | WP_011898314.1 | IS3 family transposase ISAs6 | Transposase |
| QDU35_RS23180 (QDU35_23180) | 57454..58248 | + | 795 | Protein_62 | IS3 family transposase ISLad1 | Transposase |
| QDU35_RS23185 (QDU35_23185) | 58710..59396 | + | 687 | WP_088814088.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QDU35_RS23190 (QDU35_23190) | 59440..60102 | + | 663 | WP_042469092.1 | tyrosine-type recombinase/integrase | - |
| QDU35_RS23195 (QDU35_23195) | 60149..61837 | + | 1689 | WP_088822004.1 | AIPR family protein | - |
| QDU35_RS23200 (QDU35_23200) | 62371..63288 | - | 918 | WP_088814112.1 | IS5 family transposase ISAs4 | Transposase |
| QDU35_RS23205 (QDU35_23205) | 63389..66877 | - | 3489 | WP_042468249.1 | SNF2-related protein | - |
| QDU35_RS23210 (QDU35_23210) | 67082..67315 | - | 234 | WP_042468250.1 | hypothetical protein | - |
| QDU35_RS23215 (QDU35_23215) | 67385..67528 | - | 144 | WP_155268747.1 | hypothetical protein | - |
| QDU35_RS23220 (QDU35_23220) | 68151..68486 | + | 336 | Protein_70 | hypothetical protein | - |
| QDU35_RS23225 (QDU35_23225) | 68670..69734 | + | 1065 | WP_080697402.1 | ParA family protein | - |
| QDU35_RS23230 (QDU35_23230) | 69936..70163 | + | 228 | WP_225854524.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|