MGE detailed information
MGE type: Conjugative plasmid MGE length: 69294 bp
Accession: NZ_CP122943 Location: 1..69294 Organism: Escherichia coli strain ETEC1701 Replicon: plasmid unnamed5
Accession: NZ_CP122943 Location: 1..69294 Organism: Escherichia coli strain ETEC1701 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX07_RS25865 (204) | 204..455 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| QDX07_RS25870 (452) | 452..967 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDX07_RS25875 (1102) | 1102..1323 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| QDX07_RS25880 (1483) | 1483..4110 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| QDX07_RS25885 (4107) | 4107..4493 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| QDX07_RS25890 (4490) | 4490..5122 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| QDX07_RS25895 (5119) | 5119..6111 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| QDX07_RS25900 (6137) | 6137..6598 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| QDX07_RS25905 (6628) | 6628..7080 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| QDX07_RS25910 (7108) | 7108..7746 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDX07_RS25915 (7743) | 7743..9551 | + | 1809 | WP_063078212.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDX07_RS25920 (9578) | 9578..9838 | + | 261 | WP_000864323.1 | conjugal transfer protein TrbE | - |
| QDX07_RS25925 (9831) | 9831..10574 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDX07_RS25930 (10590) | 10590..10847 | + | 258 | Protein_14 | conjugal transfer protein TrbA | - |
| QDX07_RS25940 (12187) | 12187..12273 | + | 87 | Protein_16 | conjugal transfer protein TrbA | - |
| QDX07_RS25945 (12392) | 12392..12676 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDX07_RS25950 (12663) | 12663..13208 | + | 546 | WP_000059818.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDX07_RS25955 (13198) | 13198..13512 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| QDX07_RS25960 (13466) | 13466..13858 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| QDX07_RS25965 (13845) | 13845..15218 | + | 1374 | WP_000944325.1 | conjugal transfer pilus assembly protein TraH | - |
| QDX07_RS25970 (15215) | 15215..18037 | + | 2823 | WP_062873754.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDX07_RS25975 (18052) | 18052..18555 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| QDX07_RS25980 (18587) | 18587..19318 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| QDX07_RS25985 (19521) | 19521..20258 | + | 738 | WP_000199900.1 | hypothetical protein | - |
| QDX07_RS25990 (20309) | 20309..22597 | + | 2289 | WP_282832574.1 | Coupling protein TraD | VF |
| QDX07_RS25995 (22597) | 22597..27867 | + | 5271 | WP_000986938.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDX07_RS26000 (27887) | 27887..28633 | + | 747 | WP_000205711.1 | conjugal transfer pilus acetylase TraX | - |
| QDX07_RS26005 (28692) | 28692..29552 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| QDX07_RS26010 (29655) | 29655..30215 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| QDX07_RS26015 (30346) | 30346..30555 | + | 210 | WP_001297500.1 | hypothetical protein | - |
| QDX07_RS26020 (30967) | 30967..31593 | + | 627 | WP_000794191.1 | NYN domain-containing protein | - |
| QDX07_RS26025 (31745) | 31745..32335 | + | 591 | WP_001375082.1 | DUF2726 domain-containing protein | - |
| QDX07_RS26030 (32575) | 32575..32823 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| QDX07_RS26035 (33068) | 33068..33142 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| QDX07_RS26040 (33135) | 33135..33992 | + | 858 | WP_042634321.1 | incFII family plasmid replication initiator RepA | - |
| QDX07_RS26045 (34991) | 34991..36028 | + | 1038 | WP_032083970.1 | DNA-binding protein | - |
| QDX07_RS26050 (36204) | 36204..36473 | + | 270 | WP_000079937.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDX07_RS26055 (36473) | 36473..36751 | + | 279 | WP_244461648.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDX07_RS26060 (37060) | 37060..38202 | + | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| QDX07_RS26065 (38175) | 38175..38279 | + | 105 | Protein_41 | hypothetical protein | - |
| QDX07_RS26070 (38291) | 38291..38596 | + | 306 | WP_000482654.1 | hypothetical protein | VF |
| QDX07_RS26080 (39886) | 39886..43977 | + | 4092 | WP_032491197.1 | Serine protease SepA autotransporter | VF |
| QDX07_RS26085 (44180) | 44180..44874 | + | 695 | WP_085949012.1 | IS1 family transposase IS1N | Transposase |
| QDX07_RS26090 (45093) | 45093..45487 | - | 395 | Protein_46 | plasmid partitioning/stability family protein | - |
| QDX07_RS26095 (45487) | 45487..46446 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| QDX07_RS26100 (46885) | 46885..47787 | + | 903 | WP_077628577.1 | DUF1281 domain-containing protein | - |
| QDX07_RS26105 (47791) | 47791..48096 | + | 306 | WP_063085138.1 | hypothetical protein | - |
| QDX07_RS26110 (48173) | 48173..48856 | + | 684 | WP_000085944.1 | DNA methylase | - |
| QDX07_RS26115 (48857) | 48857..49078 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| QDX07_RS26120 (49059) | 49059..49526 | + | 468 | WP_236323724.1 | DUF1380 family protein | - |
| QDX07_RS26125 (49577) | 49577..50353 | + | 777 | WP_053528591.1 | hypothetical protein | - |
| QDX07_RS26130 (50768) | 50768..51193 | + | 426 | WP_052898751.1 | antirestriction protein | - |
| QDX07_RS26135 (51240) | 51240..51662 | + | 423 | WP_001613000.1 | DUF1380 family protein | - |
| QDX07_RS26140 (51659) | 51659..51850 | + | 192 | WP_062873855.1 | hypothetical protein | - |
| QDX07_RS26145 (52046) | 52046..52273 | + | 228 | WP_071776744.1 | hypothetical protein | - |
| QDX07_RS26150 (52888) | 52888..53118 | + | 231 | WP_001537563.1 | hypothetical protein | - |
| QDX07_RS26155 (53170) | 53170..54531 | + | 1362 | WP_063078170.1 | DUF3560 domain-containing protein | - |
| QDX07_RS26160 (54578) | 54578..55141 | + | 564 | WP_042634411.1 | class I SAM-dependent methyltransferase | - |
| QDX07_RS26165 (55741) | 55741..55947 | + | 207 | WP_000547945.1 | hypothetical protein | - |
| QDX07_RS26170 (55973) | 55973..56503 | + | 531 | WP_032214168.1 | single-stranded DNA-binding protein | - |
| QDX07_RS26175 (56559) | 56559..56792 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| QDX07_RS26180 (56856) | 56856..58814 | + | 1959 | WP_063078168.1 | ParB/RepB/Spo0J family partition protein | - |
| QDX07_RS26185 (58869) | 58869..59303 | + | 435 | WP_042634413.1 | conjugation system SOS inhibitor PsiB | - |
| QDX07_RS26190 (59300) | 59300..60086 | + | 787 | Protein_66 | plasmid SOS inhibition protein A | - |
| - (60031) | 60031..60248 | + | 218 | NuclAT_0 | - | - |
| - (60031) | 60031..60248 | + | 218 | NuclAT_0 | - | - |
| - (60031) | 60031..60248 | + | 218 | NuclAT_0 | - | - |
| - (60031) | 60031..60248 | + | 218 | NuclAT_0 | - | - |
| - (60031) | 60031..60248 | - | 218 | NuclAT_0 | - | - |
| QDX07_RS26195 (60236) | 60236..60388 | + | 153 | Protein_67 | DUF5431 family protein | - |
| QDX07_RS26200 (60333) | 60333..60455 | + | 123 | WP_223163518.1 | Hok/Gef family protein | - |
| QDX07_RS26205 (60756) | 60756..61052 | - | 297 | Protein_69 | hypothetical protein | - |
| QDX07_RS26210 (61276) | 61276..61572 | + | 297 | WP_001272240.1 | hypothetical protein | - |
| QDX07_RS26215 (61678) | 61678..62499 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| QDX07_RS26220 (62796) | 62796..63443 | - | 648 | WP_000601040.1 | hypothetical protein | VF |
| QDX07_RS26225 (63719) | 63719..64102 | + | 384 | WP_001151530.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDX07_RS26230 (64303) | 64303..64941 | + | 639 | WP_236262580.1 | transcriptional regulator TraJ family protein | - |
| QDX07_RS26235 (65061) | 65061..65288 | + | 228 | WP_000589558.1 | conjugal transfer relaxosome protein TraY | - |
| QDX07_RS26240 (65322) | 65322..65684 | + | 363 | WP_033566647.1 | type IV conjugative transfer system pilin TraA | - |
| QDX07_RS26245 (65689) | 65689..66000 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QDX07_RS26250 (66022) | 66022..66588 | + | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| QDX07_RS26255 (66575) | 66575..67303 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QDX07_RS26260 (67303) | 67303..68730 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDX07_RS26265 (68720) | 68720..69292 | + | 573 | WP_024179131.1 | conjugal transfer pilus-stabilizing protein TraP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|