MGE detailed information
MGE type: Prophage MGE length: 27403 bp
Accession: NZ_CP122929 Location: 2297568..2324970 Organism: Escherichia coli strain ETEC1702 Replicon: chromosome
Accession: NZ_CP122929 Location: 2297568..2324970 Organism: Escherichia coli strain ETEC1702 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX05_RS11370 (2292949) | 2292949..2293659 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QDX05_RS11375 (2293662) | 2293662..2294222 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QDX05_RS11380 (2294257) | 2294257..2294598 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QDX05_RS11385 (2294733) | 2294733..2295059 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QDX05_RS11390 (2295265) | 2295265..2296479 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDX05_RS11395 (2296491) | 2296491..2297510 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| QDX05_RS11400 (2297698) | 2297698..2298978 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QDX05_RS11405 (2299013) | 2299013..2299264 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QDX05_RS11410 (2299337) | 2299337..2301046 | - | 1710 | Protein_2230 | 3'-5' exoribonuclease | - |
| QDX05_RS11415 (2301034) | 2301034..2301291 | + | 258 | Protein_2231 | hypothetical protein | - |
| QDX05_RS11420 (2301332) | 2301332..2301754 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| QDX05_RS11425 (2301751) | 2301751..2302240 | + | 490 | Protein_2233 | class I SAM-dependent methyltransferase | - |
| QDX05_RS11430 (2302623) | 2302623..2304162 | - | 1540 | Protein_2234 | IS66 family transposase ISEc22 | Transposase |
| QDX05_RS11435 (2304211) | 2304211..2304441 | - | 231 | Protein_2235 | IS66 family insertion sequence element accessory protein TnpB | - |
| QDX05_RS11440 (2304447) | 2304447..2304569 | - | 123 | Protein_2236 | IS66 family transposase ISEc22 | Transposase |
| QDX05_RS11445 (2304812) | 2304812..2305233 | + | 422 | Protein_2237 | hypothetical protein | - |
| QDX05_RS11455 (2306666) | 2306666..2307688 | + | 1023 | Protein_2239 | ISNCY family transposase ISCARN112 | Transposase |
| QDX05_RS11460 (2307809) | 2307809..2307958 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDX05_RS11465 (2308395) | 2308395..2308727 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDX05_RS11470 (2308930) | 2308930..2309235 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDX05_RS11475 (2309260) | 2309260..2309499 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDX05_RS11480 (2309499) | 2309499..2309786 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDX05_RS11485 (2309858) | 2309858..2310013 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDX05_RS11490 (2310230) | 2310230..2310481 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDX05_RS11495 (2310548) | 2310548..2310826 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDX05_RS11500 (2310828) | 2310828..2311876 | + | 1049 | Protein_2248 | DUF968 domain-containing protein | - |
| QDX05_RS11505 (2311890) | 2311890..2312642 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDX05_RS11510 (2312920) | 2312920..2313009 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDX05_RS11515 (2313064) | 2313064..2313276 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDX05_RS11520 (2313577) | 2313577..2313792 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDX05_RS11525 (2314156) | 2314156..2314326 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QDX05_RS11530 (2314546) | 2314546..2314761 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDX05_RS11535 (2314766) | 2314766..2315077 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QDX05_RS11540 (2315074) | 2315074..2315607 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDX05_RS11545 (2315604) | 2315604..2316100 | + | 497 | Protein_2257 | DUF2514 domain-containing protein | - |
| QDX05_RS11550 (2316461) | 2316461..2316673 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDX05_RS11555 (2316684) | 2316684..2316872 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDX05_RS11560 (2316875) | 2316875..2316940 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QDX05_RS11565 (2316945) | 2316945..2317175 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDX05_RS11570 (2317347) | 2317347..2317520 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDX05_RS11575 (2317672) | 2317672..2318082 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QDX05_RS11580 (2318140) | 2318140..2318373 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QDX05_RS11585 (2318762) | 2318762..2319307 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| QDX05_RS11590 (2319282) | 2319282..2321087 | + | 1806 | WP_049254577.1 | phage terminase large subunit family protein | - |
| QDX05_RS11595 (2321087) | 2321087..2321662 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| QDX05_RS11600 (2321760) | 2321760..2322350 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDX05_RS11605 (2322667) | 2322667..2322900 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDX05_RS11610 (2322969) | 2322969..2323082 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDX05_RS11615 (2323603) | 2323603..2324970 | + | 1368 | Protein_2271 | MHS family MFS transporter | - |
| QDX05_RS11620 (2325059) | 2325059..2326519 | + | 1461 | WP_282833993.1 | mannitol dehydrogenase family protein | - |
| QDX05_RS11625 (2326554) | 2326554..2326757 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDX05_RS11630 (2326935) | 2326935..2327621 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDX05_RS11635 (2327710) | 2327710..2328456 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|