MGE detailed information
MGE type: Mobilizable plasmid MGE length: 63267 bp
Accession: NZ_CP122885 Location: 1..63267 Organism: Escherichia coli strain ETEC1716 Replicon: plasmid unnamed5
Accession: NZ_CP122885 Location: 1..63267 Organism: Escherichia coli strain ETEC1716 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX09_RS27175 (QDX09_27175) | 1208..2452 | - | 1245 | WP_000750517.1 | hypothetical protein | VF |
| QDX09_RS27180 (QDX09_27180) | 2465..3100 | - | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| QDX09_RS27185 (QDX09_27185) | 3104..3586 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| QDX09_RS27190 (QDX09_27190) | 3653..4210 | - | 558 | WP_000095047.1 | type 4 pilus major pilin | - |
| QDX09_RS27195 (QDX09_27195) | 4255..5364 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QDX09_RS27200 (QDX09_27200) | 5355..6893 | - | 1539 | WP_001420475.1 | Type II secretion system protein E | VF |
| QDX09_RS27205 (QDX09_27205) | 6918..7412 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| QDX09_RS27210 (QDX09_27210) | 7396..8706 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| QDX09_RS27215 (QDX09_27215) | 8757..10400 | - | 1644 | WP_001035587.1 | Outer membrane lipoprotein BfpB | VF |
| QDX09_RS27220 (QDX09_27220) | 10393..10923 | - | 531 | WP_001220542.1 | sigma 54-interacting transcriptional regulator | - |
| QDX09_RS27225 (QDX09_27225) | 10970..12928 | - | 1959 | WP_000338976.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QDX09_RS27230 (QDX09_27230) | 12944..13999 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| QDX09_RS27235 (QDX09_27235) | 14018..15157 | - | 1140 | WP_000790641.1 | Type IV secretion system protein virB10 | VF |
| QDX09_RS27240 (QDX09_27240) | 15147..15917 | - | 771 | WP_282862767.1 | Type IV secretion system protein PtlF | VF |
| QDX09_RS27245 (QDX09_27245) | 15914..16648 | - | 735 | WP_000432283.1 | Type IV secretion system protein virB8 | VF |
| QDX09_RS27250 (QDX09_27250) | 16814..19171 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| QDX09_RS27255 (QDX09_27255) | 19177..19497 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| QDX09_RS27260 (QDX09_27260) | 19568..19858 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| QDX09_RS27265 (QDX09_27265) | 19858..20442 | - | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| QDX09_RS27270 (QDX09_27270) | 20463..20861 | - | 399 | WP_001153668.1 | hypothetical protein | - |
| QDX09_RS27275 (QDX09_27275) | 20980..21417 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| QDX09_RS27280 (QDX09_27280) | 21423..22658 | - | 1236 | WP_000733393.1 | hypothetical protein | VF |
| QDX09_RS27285 (QDX09_27285) | 22661..22960 | - | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QDX09_RS27290 (QDX09_27290) | 23027..23662 | - | 636 | WP_000835771.1 | hypothetical protein | - |
| QDX09_RS27295 (QDX09_27295) | 23710..24069 | + | 360 | WP_282862769.1 | DUF5710 domain-containing protein | - |
| QDX09_RS27300 (QDX09_27300) | 24374..24520 | + | 147 | WP_020245701.1 | hypothetical protein | - |
| QDX09_RS27305 (QDX09_27305) | 24743..24967 | - | 225 | WP_000713561.1 | EexN family lipoprotein | - |
| QDX09_RS27310 (QDX09_27310) | 24976..25620 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| QDX09_RS27315 (QDX09_27315) | 25626..26621 | - | 996 | WP_001028541.1 | hypothetical protein | VF |
| QDX09_RS27320 (QDX09_27320) | 26625..26882 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| QDX09_RS27325 (QDX09_27325) | 26879..27181 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| QDX09_RS27330 (QDX09_27330) | 27162..27419 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| QDX09_RS27335 (QDX09_27335) | 27452..27898 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| QDX09_RS27340 (QDX09_27340) | 27909..28079 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| QDX09_RS27345 (QDX09_27345) | 28083..28526 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| QDX09_RS27350 (QDX09_27350) | 28900..29853 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| QDX09_RS27355 (QDX09_27355) | 29899..30093 | - | 195 | WP_001127356.1 | DUF1187 family protein | - |
| QDX09_RS27360 (QDX09_27360) | 30086..30538 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
| QDX09_RS27365 (QDX09_27365) | 31676..32704 | + | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| QDX09_RS27370 (QDX09_27370) | 32802..33173 | - | 372 | WP_227472325.1 | hypothetical protein | - |
| QDX09_RS27375 (QDX09_27375) | 33979..35187 | - | 1209 | WP_282862762.1 | IS200-IS605 family transposase IS609 | Transposase |
| QDX09_RS27380 (QDX09_27380) | 35588..35740 | + | 153 | Protein_41 | DUF5431 family protein | - |
| QDX09_RS27385 (QDX09_27385) | 35685..35807 | + | 123 | WP_223202818.1 | Hok/Gef family protein | - |
| QDX09_RS27390 (QDX09_27390) | 35957..36553 | + | 597 | WP_000125164.1 | ProQ/FINO family protein | - |
| QDX09_RS27395 (QDX09_27395) | 36571..36855 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| QDX09_RS27400 (QDX09_27400) | 36929..37594 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| QDX09_RS27405 (QDX09_27405) | 38191..38520 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| QDX09_RS27410 (QDX09_27410) | 39203..40390 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDX09_RS27415 (QDX09_27415) | 40390..40755 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDX09_RS27420 (QDX09_27420) | 41032..42219 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDX09_RS27425 (QDX09_27425) | 42219..42584 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDX09_RS27430 (QDX09_27430) | 42760..43083 | + | 324 | WP_000432876.1 | hypothetical protein | - |
| QDX09_RS27435 (QDX09_27435) | 43124..43333 | + | 210 | WP_000866037.1 | hypothetical protein | - |
| QDX09_RS27440 (QDX09_27440) | 43431..43655 | + | 225 | WP_000814383.1 | hypothetical protein | - |
| QDX09_RS27445 (QDX09_27445) | 43707..43967 | + | 261 | WP_000702245.1 | hypothetical protein | Toxin Detail |
| QDX09_RS27450 (QDX09_27450) | 43957..44208 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| QDX09_RS27455 (QDX09_27455) | 44758..45036 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| QDX09_RS27460 (QDX09_27460) | 45424..45867 | - | 444 | WP_000192626.1 | hypothetical protein | - |
| QDX09_RS27465 (QDX09_27465) | 46164..46346 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| QDX09_RS27470 (QDX09_27470) | 46371..46808 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| QDX09_RS27475 (QDX09_27475) | 46939..47265 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| QDX09_RS27480 (QDX09_27480) | 47262..47471 | - | 210 | WP_000951714.1 | hypothetical protein | - |
| QDX09_RS27485 (QDX09_27485) | 47473..47670 | - | 198 | WP_001439049.1 | hypothetical protein | - |
| QDX09_RS27490 (QDX09_27490) | 47994..48125 | - | 132 | Protein_63 | hypothetical protein | - |
| QDX09_RS27495 (QDX09_27495) | 48145..48852 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| QDX09_RS27500 (QDX09_27500) | 48854..49606 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| QDX09_RS27505 (QDX09_27505) | 49716..50024 | - | 309 | WP_105075932.1 | zinc transporter | - |
| QDX09_RS27510 (QDX09_27510) | 50393..50734 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| QDX09_RS27515 (QDX09_27515) | 50731..54590 | + | 3860 | Protein_68 | relaxase | - |
| QDX09_RS27520 (QDX09_27520) | 54633..55073 | - | 441 | WP_000666087.1 | hypothetical protein | - |
| QDX09_RS27525 (QDX09_27525) | 55318..55761 | - | 444 | WP_000465834.1 | hypothetical protein | - |
| QDX09_RS27530 (QDX09_27530) | 55907..56113 | - | 207 | WP_000850855.1 | hemolysin expression modulator Hha | - |
| QDX09_RS27535 (QDX09_27535) | 56182..58347 | - | 2166 | WP_025380732.1 | type IA DNA topoisomerase | - |
| QDX09_RS27540 (QDX09_27540) | 58352..58927 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| QDX09_RS27545 (QDX09_27545) | 59097..60773 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| QDX09_RS27550 (QDX09_27550) | 60868..61400 | - | 533 | Protein_75 | thermonuclease family protein | - |
| QDX09_RS27555 (QDX09_27555) | 61430..62083 | - | 654 | WP_000572553.1 | hypothetical protein | - |
| QDX09_RS27560 (QDX09_27560) | 62095..63219 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|