MGE detailed information
MGE type: Conjugative plasmid MGE length: 118236 bp
Accession: NZ_CP122881 Location: 1..118236 Organism: Escherichia coli strain ETEC1716 Replicon: plasmid unnamed1
Accession: NZ_CP122881 Location: 1..118236 Organism: Escherichia coli strain ETEC1716 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX09_RS25065 (1) | 1..849 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| QDX09_RS25070 (934) | 934..1269 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| QDX09_RS25075 (1503) | 1503..1835 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QDX09_RS25080 (1846) | 1846..4545 | + | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| QDX09_RS25085 (4581) | 4581..6872 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| QDX09_RS25090 (6865) | 6865..7935 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| QDX09_RS25095 (7954) | 7954..9162 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (9342) | 9342..9402 | - | 61 | NuclAT_1 | - | - |
| - (9342) | 9342..9402 | - | 61 | NuclAT_1 | - | - |
| - (9342) | 9342..9402 | - | 61 | NuclAT_1 | - | - |
| - (9342) | 9342..9402 | - | 61 | NuclAT_1 | - | - |
| QDX09_RS25100 (9469) | 9469..10248 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (10763) | 10763..10825 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (10763) | 10763..10825 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (10763) | 10763..10825 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (10763) | 10763..10825 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| QDX09_RS25105 (10875) | 10875..11027 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| QDX09_RS25110 (11099) | 11099..11350 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - (11737) | 11737..11788 | - | 52 | NuclAT_2 | - | - |
| - (11737) | 11737..11788 | - | 52 | NuclAT_2 | - | - |
| - (11737) | 11737..11788 | - | 52 | NuclAT_2 | - | - |
| - (11737) | 11737..11788 | - | 52 | NuclAT_2 | - | - |
| QDX09_RS25115 (12274) | 12274..12450 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| QDX09_RS25120 (12659) | 12659..12868 | - | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| QDX09_RS25125 (12966) | 12966..13580 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDX09_RS25130 (13656) | 13656..15824 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| QDX09_RS25135 (15921) | 15921..16505 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QDX09_RS25140 (16534) | 16534..17736 | - | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| QDX09_RS25145 (17703) | 17703..18317 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| QDX09_RS25150 (18317) | 18317..21361 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| QDX09_RS25155 (21451) | 21451..22251 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QDX09_RS25160 (22235) | 22235..22357 | - | 123 | Protein_19 | putative conjugal transfer protein TraS | - |
| QDX09_RS25165 (22389) | 22389..23981 | - | 1593 | WP_000080220.1 | IS66 family transposase ISEc23 | Transposase |
| QDX09_RS25170 (24012) | 24012..24362 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| QDX09_RS25175 (24359) | 24359..24784 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDX09_RS25180 (24868) | 24868..24942 | - | 75 | Protein_23 | putative conjugal transfer protein TraS | - |
| QDX09_RS25185 (25006) | 25006..25410 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| QDX09_RS25190 (25461) | 25461..25988 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QDX09_RS25195 (25988) | 25988..26692 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QDX09_RS25200 (26692) | 26692..27981 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| QDX09_RS25205 (27984) | 27984..28967 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| QDX09_RS25210 (28978) | 28978..29670 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QDX09_RS25215 (29667) | 29667..30014 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDX09_RS25220 (30032) | 30032..33799 | - | 3768 | WP_001141534.1 | DUF5710 domain-containing protein | - |
| QDX09_RS25225 (33889) | 33889..34440 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| QDX09_RS25230 (34455) | 34455..34745 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QDX09_RS25235 (34742) | 34742..35890 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QDX09_RS25240 (35887) | 35887..36705 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| QDX09_RS25245 (36702) | 36702..37160 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDX09_RS25250 (37555) | 37555..38139 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QDX09_RS25255 (38199) | 38199..39401 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QDX09_RS25260 (39487) | 39487..40311 | - | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| QDX09_RS25265 (40462) | 40462..41616 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| QDX09_RS25270 (41615) | 41615..41899 | + | 285 | WP_187642572.1 | pilus assembly protein PilV | - |
| QDX09_RS25275 (43054) | 43054..44346 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QDX09_RS25280 (44346) | 44346..45002 | - | 657 | WP_282862694.1 | hypothetical protein | VF |
| QDX09_RS25285 (44987) | 44987..45547 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QDX09_RS25290 (45557) | 45557..46171 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| QDX09_RS25295 (46189) | 46189..47286 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QDX09_RS25300 (47299) | 47299..48852 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QDX09_RS25305 (48863) | 48863..49315 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| QDX09_RS25310 (49302) | 49302..50597 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| QDX09_RS25315 (50590) | 50590..52272 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| QDX09_RS25320 (52286) | 52286..52723 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QDX09_RS25325 (52723) | 52723..53789 | - | 1067 | Protein_52 | hypothetical protein | VF |
| QDX09_RS25330 (54413) | 54413..54709 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| QDX09_RS25335 (54885) | 54885..55139 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QDX09_RS25340 (55301) | 55301..55852 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| QDX09_RS25345 (56025) | 56025..56708 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QDX09_RS25350 (56962) | 56962..57495 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| QDX09_RS25355 (57937) | 57937..58224 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QDX09_RS25360 (58142) | 58142..58372 | - | 231 | WP_228772074.1 | ash family protein | - |
| QDX09_RS25365 (59378) | 59378..60409 | + | 1032 | WP_000907870.1 | plasmid replication initiator RepA | - |
| QDX09_RS25370 (60805) | 60805..61170 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDX09_RS25375 (61170) | 61170..62357 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDX09_RS25380 (62544) | 62544..62939 | + | 396 | WP_282862695.1 | Hg(II)-responsive transcriptional regulator | - |
| QDX09_RS25385 (62985) | 62985..63254 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | - |
| QDX09_RS25390 (63309) | 63309..63467 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| QDX09_RS25395 (64044) | 64044..65231 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDX09_RS25400 (65194) | 65194..65595 | - | 402 | WP_000124097.1 | hypothetical protein | - |
| QDX09_RS25405 (65684) | 65684..66139 | + | 456 | Protein_68 | mercuric reductase | - |
| QDX09_RS25410 (66157) | 66157..66519 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| QDX09_RS25415 (66516) | 66516..66752 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| QDX09_RS25420 (66788) | 66788..67456 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| QDX09_RS25425 (67531) | 67531..69210 | + | 1680 | WP_000179844.1 | DDE-type integrase/transposase/recombinase | - |
| QDX09_RS25430 (69213) | 69213..70073 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| QDX09_RS25435 (70175) | 70175..71698 | + | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| QDX09_RS25440 (71685) | 71685..72470 | + | 786 | WP_000983249.1 | IS21 family transposase IS1326 | Transposase |
| QDX09_RS25445 (72646) | 72646..73146 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| QDX09_RS25450 (73415) | 73415..74119 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QDX09_RS25455 (74220) | 74220..74498 | + | 279 | WP_004217866.1 | DUF3330 domain-containing protein | - |
| QDX09_RS25460 (74674) | 74674..75234 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| QDX09_RS25465 (75238) | 75238..78204 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QDX09_RS25470 (78262) | 78262..78504 | + | 243 | WP_000844627.1 | transposase | - |
| QDX09_RS25475 (78536) | 78536..79186 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QDX09_RS25480 (79292) | 79292..80491 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| QDX09_RS25485 (80523) | 80523..81407 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| QDX09_RS25490 (81545) | 81545..81937 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| QDX09_RS25495 (81941) | 81941..83692 | + | 1752 | Protein_86 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QDX09_RS25500 (83727) | 83727..84530 | + | 804 | Protein_87 | 3'-5' exonuclease | - |
| QDX09_RS25505 (84671) | 84671..85120 | + | 450 | WP_001236003.1 | hypothetical protein | - |
| QDX09_RS25510 (85597) | 85597..85863 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| QDX09_RS25515 (85863) | 85863..86357 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| QDX09_RS25520 (86413) | 86413..87015 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| QDX09_RS25525 (87369) | 87369..88715 | + | 1347 | WP_001132032.1 | protein YagA | - |
| QDX09_RS25530 (89128) | 89128..90873 | + | 1746 | WP_282862689.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QDX09_RS25535 (90891) | 90891..91238 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| QDX09_RS25540 (91357) | 91357..91705 | + | 349 | Protein_95 | DUF6404 family protein | - |
| QDX09_RS25545 (91725) | 91725..92315 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| QDX09_RS25550 (92315) | 92315..92572 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| QDX09_RS25555 (92923) | 92923..93924 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| QDX09_RS25560 (94100) | 94100..94444 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| QDX09_RS25565 (94943) | 94943..95197 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| QDX09_RS25570 (95242) | 95242..96168 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| QDX09_RS25575 (96700) | 96700..97113 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| QDX09_RS25580 (97115) | 97115..97894 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| QDX09_RS25585 (98074) | 98074..98718 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QDX09_RS25590 (98805) | 98805..99113 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QDX09_RS25595 (99527) | 99527..100506 | + | 980 | Protein_106 | plasmid segregation protein ParM | - |
| QDX09_RS25600 (100499) | 100499..100915 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QDX09_RS25605 (100917) | 100917..102191 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| QDX09_RS25610 (102191) | 102191..102628 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QDX09_RS25615 (102625) | 102625..102873 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QDX09_RS25620 (103291) | 103291..104193 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| QDX09_RS25625 (104190) | 104190..104501 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| QDX09_RS25630 (104578) | 104578..105261 | + | 684 | WP_000086178.1 | DNA methylase | - |
| QDX09_RS25635 (105262) | 105262..105483 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| QDX09_RS25640 (105443) | 105443..105929 | + | 487 | Protein_115 | DUF1380 family protein | - |
| QDX09_RS25645 (105980) | 105980..106750 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| QDX09_RS25650 (107168) | 107168..107593 | + | 426 | WP_042634408.1 | antirestriction protein | - |
| QDX09_RS25655 (107640) | 107640..108062 | + | 423 | WP_042634409.1 | DUF1380 family protein | - |
| QDX09_RS25660 (108059) | 108059..108250 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| QDX09_RS25665 (108321) | 108321..108668 | + | 348 | WP_001398159.1 | hypothetical protein | - |
| QDX09_RS25670 (109020) | 109020..109547 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| QDX09_RS25675 (109605) | 109605..109838 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| QDX09_RS25680 (109897) | 109897..111855 | + | 1959 | WP_001739190.1 | ParB/RepB/Spo0J family partition protein | - |
| QDX09_RS25685 (111910) | 111910..112344 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QDX09_RS25690 (112341) | 112341..113060 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QDX09_RS25695 (113057) | 113057..113653 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| QDX09_RS25700 (114116) | 114116..114616 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| QDX09_RS25705 (115345) | 115345..115779 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QDX09_RS25710 (115871) | 115871..116137 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QDX09_RS25715 (116202) | 116202..117143 | + | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| QDX09_RS25720 (117205) | 117205..117375 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| QDX09_RS25725 (117406) | 117406..117657 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|