NZ_CP1228802570124..2582933

MGE detailed information

MGE type: Genomic_island        MGE length: 12810 bp
Accession: NZ_CP122880        Location: 2570124..2582933         Organism: Escherichia coli strain ETEC1716       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QDX09_RS12865 (2570124) 2570124..2570390 + 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
QDX09_RS12870 (2570390) 2570390..2571712 + 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
QDX09_RS12875 (2572024) 2572024..2572232 + 209 Protein_2522 AraC family transcriptional regulator -
QDX09_RS12880 (2572487) 2572487..2573713 + 1227 Protein_2523 Outer membrane usher protein FimD VF
QDX09_RS12885 (2573727) 2573727..2574257 + 531 WP_000876763.1 Protein FimF VF
QDX09_RS12890 (2574270) 2574270..2574773 + 504 WP_000825452.1 Protein FimG VF
QDX09_RS12895 (2574832) 2574832..2575746 + 915 WP_000520677.1 Type 1 fimbrin D-mannose specific adhesin VF
QDX09_RS12900 (2576080) 2576080..2578359 + 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
QDX09_RS12905 (2578607) 2578607..2578804 + 198 WP_096937641.1 two-component system connector SafA -
QDX09_RS12910 (2578879) 2578879..2579640 + 762 WP_000060492.1 acid stress response transcriptional regulator YdeO -
QDX09_RS12915 (2580042) 2580042..2581724 + 1683 WP_001295684.1 sulfatase -
QDX09_RS12920 (2581776) 2581776..2582933 + 1158 WP_001301030.1 anaerobic sulfatase maturase -
QDX09_RS12925 (2582899) 2582899..2583021 - 123 WP_120795387.1 protein YneP -
QDX09_RS12930 (2583224) 2583224..2584909 + 1686 WP_096937643.1 ABC transporter ATP-binding protein/permease -
QDX09_RS12935 (2584947) 2584947..2587319 + 2373 WP_000832437.1 TonB-dependent receptor plug domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.003
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.003
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.003
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.003
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.005
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.006
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.003
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.003
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.003
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.003
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.003
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.004
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.003