MGE detailed information
MGE type: Conjugative plasmid MGE length: 105313 bp
Accession: NZ_CP122866 Location: 1..105313 Organism: Escherichia coli strain ETEC1720 Replicon: plasmid unnamed7
Accession: NZ_CP122866 Location: 1..105313 Organism: Escherichia coli strain ETEC1720 Replicon: plasmid unnamed7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY31_RS24925 (1) | 1..2700 | + | 2700 | WP_001360283.1 | hypothetical protein | Relaxase |
| QDY31_RS24930 (2736) | 2736..5027 | - | 2292 | WP_072800778.1 | F-type conjugative transfer protein TrbC | - |
| QDY31_RS24935 (5020) | 5020..6090 | - | 1071 | WP_015058906.1 | IncI1-type conjugal transfer protein TrbB | - |
| QDY31_RS24940 (6109) | 6109..7317 | - | 1209 | WP_282835985.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (7497) | 7497..7554 | - | 58 | NuclAT_1 | - | - |
| - (7497) | 7497..7554 | - | 58 | NuclAT_1 | - | - |
| - (7497) | 7497..7554 | - | 58 | NuclAT_1 | - | - |
| - (7497) | 7497..7554 | - | 58 | NuclAT_1 | - | - |
| QDY31_RS24945 (7624) | 7624..8403 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (8918) | 8918..8980 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (8918) | 8918..8980 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (8918) | 8918..8980 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (8918) | 8918..8980 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| QDY31_RS24950 (9030) | 9030..9182 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| QDY31_RS24955 (9254) | 9254..9505 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| - (9892) | 9892..9943 | - | 52 | NuclAT_2 | - | - |
| - (9892) | 9892..9943 | - | 52 | NuclAT_2 | - | - |
| - (9892) | 9892..9943 | - | 52 | NuclAT_2 | - | - |
| - (9892) | 9892..9943 | - | 52 | NuclAT_2 | - | - |
| QDY31_RS24960 (10623) | 10623..10718 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QDY31_RS24965 (10783) | 10783..10959 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| QDY31_RS24970 (11291) | 11291..11500 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| QDY31_RS24975 (11571) | 11571..12233 | - | 663 | WP_000644797.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDY31_RS24980 (12304) | 12304..14472 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| QDY31_RS24985 (14569) | 14569..15153 | - | 585 | WP_001037980.1 | IncI1-type conjugal transfer protein TraX | - |
| QDY31_RS24990 (15182) | 15182..16384 | - | 1203 | WP_001690627.1 | IncI1-type conjugal transfer protein TraW | - |
| QDY31_RS24995 (16351) | 16351..16965 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QDY31_RS25000 (16965) | 16965..20009 | - | 3045 | WP_001024781.1 | IncI1-type conjugal transfer protein TraU | - |
| QDY31_RS25005 (20099) | 20099..20899 | - | 801 | WP_001164783.1 | IncI1-type conjugal transfer protein TraT | - |
| QDY31_RS25010 (20883) | 20883..21071 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| QDY31_RS25015 (21135) | 21135..21539 | - | 405 | WP_000086962.1 | IncI1-type conjugal transfer protein TraR | - |
| QDY31_RS25020 (21590) | 21590..22117 | - | 528 | WP_001055568.1 | conjugal transfer protein TraQ | - |
| QDY31_RS25025 (22117) | 22117..22821 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QDY31_RS25030 (22821) | 22821..24110 | - | 1290 | WP_001271995.1 | conjugal transfer protein TraO | - |
| QDY31_RS25035 (24113) | 24113..25096 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| QDY31_RS25040 (25107) | 25107..25799 | - | 693 | WP_000138553.1 | DotI/IcmL family type IV secretion protein | - |
| QDY31_RS25045 (25796) | 25796..26143 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDY31_RS25050 (26161) | 26161..29928 | - | 3768 | WP_282835990.1 | DUF5710 domain-containing protein | - |
| QDY31_RS25055 (30017) | 30017..30568 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| QDY31_RS25060 (30583) | 30583..30873 | - | 291 | WP_001330823.1 | hypothetical protein | - |
| QDY31_RS25065 (30870) | 30870..32018 | - | 1149 | WP_001024975.1 | putative protein YggR | VF |
| QDY31_RS25070 (32015) | 32015..32833 | - | 819 | WP_000866663.1 | hypothetical protein | VF |
| QDY31_RS25075 (32830) | 32830..33288 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDY31_RS25080 (33683) | 33683..34267 | - | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| QDY31_RS25085 (34327) | 34327..35529 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QDY31_RS25090 (35615) | 35615..36439 | - | 825 | WP_282835993.1 | conjugal transfer protein TraE | - |
| QDY31_RS25095 (36590) | 36590..37744 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| QDY31_RS25100 (39265) | 39265..39513 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| QDY31_RS25105 (39510) | 39510..40802 | - | 1293 | WP_001619585.1 | hypothetical protein | VF |
| QDY31_RS25110 (40802) | 40802..41458 | - | 657 | WP_001193552.1 | hypothetical protein | VF |
| QDY31_RS25115 (41443) | 41443..42003 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| QDY31_RS25120 (42013) | 42013..42627 | - | 615 | WP_000908225.1 | hypothetical protein | VF |
| QDY31_RS25125 (42644) | 42644..43729 | - | 1086 | WP_001208802.1 | hypothetical protein | VF |
| QDY31_RS25130 (43742) | 43742..45295 | - | 1554 | WP_000362206.1 | hypothetical protein | VF |
| QDY31_RS25135 (45306) | 45306..45758 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| QDY31_RS25140 (45745) | 45745..47040 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| QDY31_RS25145 (47033) | 47033..48715 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QDY31_RS25150 (48729) | 48729..49166 | - | 438 | WP_000539809.1 | hypothetical protein | VF |
| QDY31_RS25155 (49166) | 49166..50233 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| QDY31_RS25160 (51206) | 51206..51580 | - | 375 | WP_001136186.1 | PilI type IV pilus biogenesis protein | - |
| QDY31_RS25165 (51752) | 51752..52435 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QDY31_RS25170 (52689) | 52689..53222 | - | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| QDY31_RS25175 (53664) | 53664..53951 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QDY31_RS25180 (53869) | 53869..54147 | - | 279 | WP_219065241.1 | ash family protein | - |
| QDY31_RS25185 (55105) | 55105..56136 | + | 1032 | WP_000907862.1 | plasmid replication initiator RepA | - |
| QDY31_RS25190 (57042) | 57042..57326 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QDY31_RS25195 (57326) | 57326..57601 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDY31_RS25200 (57707) | 57707..57910 | + | 204 | Protein_55 | hypothetical protein | - |
| QDY31_RS25205 (58412) | 58412..59935 | - | 1524 | Protein_56 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| QDY31_RS25210 (59997) | 59997..60749 | + | 753 | WP_000602738.1 | IS6 family transposase | - |
| QDY31_RS25215 (60809) | 60809..61096 | - | 288 | Protein_58 | AAC(3) family N-acetyltransferase | - |
| QDY31_RS25220 (61171) | 61171..62196 | - | 1026 | WP_000742814.1 | Hygromycin-B 4-O-kinase | ARG |
| QDY31_RS25225 (62425) | 62425..63201 | - | 777 | WP_001199192.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| QDY31_RS25230 (63315) | 63315..64019 | + | 705 | WP_001067856.1 | IS6 family transposase IS15DII | Transposase |
| QDY31_RS25235 (64322) | 64322..64879 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDY31_RS25240 (65062) | 65062..65922 | + | 861 | WP_015058977.1 | Beta-lactamase TEM | ARG |
| QDY31_RS25245 (66095) | 66095..66745 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QDY31_RS25250 (66851) | 66851..68050 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| QDY31_RS25255 (68082) | 68082..68966 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| QDY31_RS25260 (69104) | 69104..69496 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| QDY31_RS25265 (69500) | 69500..71251 | + | 1752 | Protein_68 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QDY31_RS25270 (71563) | 71563..72378 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| QDY31_RS25275 (72439) | 72439..73242 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QDY31_RS25280 (73242) | 73242..74078 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QDY31_RS25285 (74257) | 74257..74751 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| QDY31_RS25290 (74807) | 74807..75409 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| QDY31_RS25295 (75585) | 75585..76637 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| QDY31_RS25300 (76850) | 76850..77440 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| QDY31_RS25305 (77440) | 77440..77694 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| QDY31_RS25310 (78330) | 78330..78599 | + | 270 | WP_001168933.1 | hypothetical protein | - |
| QDY31_RS25315 (78592) | 78592..79281 | + | 690 | WP_000796232.1 | hypothetical protein | - |
| QDY31_RS25320 (79278) | 79278..80066 | + | 789 | WP_000016498.1 | site-specific integrase | - |
| QDY31_RS25325 (80246) | 80246..80890 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QDY31_RS25330 (80977) | 80977..81285 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QDY31_RS25335 (81699) | 81699..82678 | + | 980 | Protein_82 | plasmid segregation protein ParM | - |
| QDY31_RS25340 (82671) | 82671..83087 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QDY31_RS25345 (83089) | 83089..84363 | - | 1275 | WP_000457497.1 | Y-family DNA polymerase | - |
| QDY31_RS25350 (84363) | 84363..84800 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QDY31_RS25355 (84797) | 84797..85045 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QDY31_RS25360 (85463) | 85463..86365 | + | 903 | WP_001331412.1 | DUF1281 domain-containing protein | - |
| QDY31_RS25365 (86369) | 86369..86674 | + | 306 | WP_032155763.1 | hypothetical protein | - |
| QDY31_RS25370 (86750) | 86750..87433 | + | 684 | WP_000086160.1 | DNA methylase | - |
| QDY31_RS25375 (87434) | 87434..87655 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| QDY31_RS25380 (87615) | 87615..88101 | + | 487 | Protein_91 | DUF1380 family protein | - |
| QDY31_RS25385 (88146) | 88146..88916 | + | 771 | WP_001006225.1 | hypothetical protein | - |
| QDY31_RS25390 (89331) | 89331..89756 | + | 426 | WP_015058199.1 | antirestriction protein | - |
| QDY31_RS25395 (89803) | 89803..90225 | + | 423 | WP_015058200.1 | DUF1380 family protein | - |
| QDY31_RS25400 (90222) | 90222..90413 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QDY31_RS25405 (90691) | 90691..92358 | - | 1668 | WP_052991863.1 | group II intron reverse transcriptase/maturase | - |
| QDY31_RS25410 (93089) | 93089..93157 | - | 69 | Protein_97 | pilus protein | - |
| QDY31_RS25415 (93526) | 93526..94059 | + | 534 | WP_001331295.1 | single-stranded DNA-binding protein | - |
| QDY31_RS25420 (94117) | 94117..94350 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| QDY31_RS25425 (94409) | 94409..96367 | + | 1959 | WP_282835980.1 | ParB/RepB/Spo0J family partition protein | - |
| QDY31_RS25430 (96422) | 96422..96856 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QDY31_RS25435 (96853) | 96853..97572 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| QDY31_RS25440 (97702) | 97702..98877 | + | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QDY31_RS25445 (99325) | 99325..99825 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| QDY31_RS25450 (100554) | 100554..100988 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| QDY31_RS25455 (101080) | 101080..101346 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QDY31_RS25460 (101411) | 101411..102325 | + | 915 | WP_000038334.1 | ISNCY family transposase ISRor2 | VF |
| QDY31_RS25465 (102325) | 102325..102606 | + | 282 | WP_001331291.1 | hypothetical protein | VF |
| QDY31_RS25470 (102637) | 102637..102888 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QDY31_RS25475 (103468) | 103468..104316 | + | 849 | WP_001077060.1 | DUF4942 domain-containing protein | - |
| QDY31_RS25480 (104402) | 104402..104737 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QDY31_RS25485 (104971) | 104971..105303 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|