MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47684 bp
Accession: NZ_CP122865 Location: 1..47684 Organism: Escherichia coli strain ETEC1720 Replicon: plasmid unnamed6
Accession: NZ_CP122865 Location: 1..47684 Organism: Escherichia coli strain ETEC1720 Replicon: plasmid unnamed6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY31_RS24635 (QDY31_24635) | 1..237 | + | 237 | Protein_0 | Type IV secretion system protein virB4 | VF |
| QDY31_RS24640 (QDY31_24640) | 760..2754 | + | 1995 | WP_072107035.1 | Type IV secretion system protein virB4 | VF |
| QDY31_RS24645 (QDY31_24645) | 2765..3523 | + | 759 | WP_000744200.1 | type IV secretion system protein | - |
| QDY31_RS24650 (QDY31_24650) | 3524..3811 | + | 288 | WP_000835347.1 | EexN family lipoprotein | - |
| QDY31_RS24655 (QDY31_24655) | 3820..4950 | + | 1131 | WP_024127751.1 | type IV secretion system protein | - |
| QDY31_RS24660 (QDY31_24660) | 5078..5206 | + | 129 | WP_001328099.1 | hypothetical protein | - |
| QDY31_RS24665 (QDY31_24665) | 5196..5909 | + | 714 | WP_000394613.1 | type IV secretion system protein | - |
| QDY31_RS24670 (QDY31_24670) | 5914..6843 | + | 930 | WP_024127752.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| QDY31_RS24675 (QDY31_24675) | 6840..8045 | + | 1206 | WP_052921380.1 | hypothetical protein | VF |
| QDY31_RS24680 (QDY31_24680) | 8047..9078 | + | 1032 | WP_052921381.1 | Type IV secretion system protein VirB11 | VF |
| QDY31_RS24685 (QDY31_24685) | 9081..10916 | + | 1836 | WP_024127754.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QDY31_RS24690 (QDY31_24690) | 10913..11326 | + | 414 | WP_024127755.1 | cag pathogenicity island Cag12 family protein | - |
| QDY31_RS24695 (QDY31_24695) | 11323..11625 | + | 303 | WP_000717627.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QDY31_RS24700 (QDY31_24700) | 11712..13865 | + | 2154 | WP_175064576.1 | type IA DNA topoisomerase | - |
| QDY31_RS24705 (QDY31_24705) | 13862..14068 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| QDY31_RS24710 (QDY31_24710) | 14084..14530 | + | 447 | WP_024127757.1 | H-NS family nucleoid-associated regulatory protein | - |
| QDY31_RS24715 (QDY31_24715) | 14613..15737 | + | 1125 | WP_282844056.1 | NACHT domain-containing protein | - |
| QDY31_RS24720 (QDY31_24720) | 15875..16516 | + | 642 | WP_282844057.1 | hypothetical protein | - |
| QDY31_RS24725 (QDY31_24725) | 16848..17975 | - | 1128 | WP_024127759.1 | hypothetical protein | - |
| QDY31_RS24730 (QDY31_24730) | 18791..18892 | + | 102 | WP_271232226.1 | DinQ-like type I toxin DqlB | - |
| QDY31_RS24735 (QDY31_24735) | 19539..20767 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| QDY31_RS24740 (QDY31_24740) | 20692..21234 | - | 543 | WP_068863055.1 | hypothetical protein | - |
| QDY31_RS24745 (QDY31_24745) | 21231..21431 | - | 201 | WP_052921392.1 | hypothetical protein | - |
| QDY31_RS24750 (QDY31_24750) | 21821..22366 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| QDY31_RS24755 (QDY31_24755) | 22503..23075 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| QDY31_RS24760 (QDY31_24760) | 23112..24503 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| QDY31_RS24765 (QDY31_24765) | 24536..24964 | + | 429 | Protein_26 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| QDY31_RS24770 (QDY31_24770) | 25283..25939 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| QDY31_RS24775 (QDY31_24775) | 26334..27349 | + | 1016 | Protein_28 | IS3 family transposase ISEc36 | Transposase |
| QDY31_RS24780 (QDY31_24780) | 27392..30397 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QDY31_RS24785 (QDY31_24785) | 30561..31118 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDY31_RS24790 (QDY31_24790) | 31301..32161 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QDY31_RS24795 (QDY31_24795) | 32313..32651 | + | 339 | WP_052921317.1 | hypothetical protein | - |
| QDY31_RS24800 (QDY31_24800) | 33030..34004 | + | 975 | WP_068863057.1 | Abi family protein | - |
| QDY31_RS24805 (QDY31_24805) | 34093..34884 | - | 792 | WP_052921319.1 | hypothetical protein | - |
| QDY31_RS24810 (QDY31_24810) | 35081..35725 | - | 645 | WP_024127744.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QDY31_RS24815 (QDY31_24815) | 36106..36768 | + | 663 | WP_000516402.1 | division plane positioning ATPase MipZ | - |
| QDY31_RS24820 (QDY31_24820) | 36866..37147 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| QDY31_RS24825 (QDY31_24825) | 37172..37654 | + | 483 | WP_282844054.1 | hypothetical protein | - |
| QDY31_RS24830 (QDY31_24830) | 37687..38148 | + | 462 | WP_282844055.1 | hypothetical protein | - |
| QDY31_RS24835 (QDY31_24835) | 38145..38501 | - | 357 | WP_052921318.1 | DNA distortion polypeptide 3 | - |
| QDY31_RS24840 (QDY31_24840) | 38638..39084 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| QDY31_RS24845 (QDY31_24845) | 39109..39963 | - | 855 | WP_001239324.1 | replication initiation protein | - |
| QDY31_RS24850 (QDY31_24850) | 41025..41276 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| QDY31_RS24855 (QDY31_24855) | 41266..41547 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDY31_RS24860 (QDY31_24860) | 41693..42016 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| QDY31_RS24865 (QDY31_24865) | 42061..42306 | + | 246 | WP_001550454.1 | hypothetical protein | - |
| QDY31_RS24870 (QDY31_24870) | 42296..42511 | + | 216 | WP_052921379.1 | hypothetical protein | - |
| QDY31_RS24875 (QDY31_24875) | 42604..42933 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| QDY31_RS24880 (QDY31_24880) | 42976..43155 | + | 180 | WP_000439078.1 | hypothetical protein | - |
| QDY31_RS24885 (QDY31_24885) | 43225..43374 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| QDY31_RS24890 (QDY31_24890) | 43387..43659 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| QDY31_RS24895 (QDY31_24895) | 43985..44530 | + | 546 | WP_000757693.1 | DNA distortion polypeptide 1 | - |
| QDY31_RS24900 (QDY31_24900) | 44533..45699 | + | 1167 | WP_000539529.1 | hypothetical protein | Relaxase |
| QDY31_RS24905 (QDY31_24905) | 46052..46570 | + | 519 | WP_024127747.1 | transcription termination/antitermination NusG family protein | - |
| QDY31_RS24910 (QDY31_24910) | 46500..46712 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| QDY31_RS24915 (QDY31_24915) | 46745..47392 | + | 648 | WP_000953529.1 | hypothetical protein | VF |
| QDY31_RS24920 (QDY31_24920) | 47370..47666 | + | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|