MGE detailed information
MGE type: Prophage MGE length: 53989 bp
Accession: NZ_CP122859 Location: 2289668..2343656 Organism: Escherichia coli strain ETEC1720 Replicon: chromosome
Accession: NZ_CP122859 Location: 2289668..2343656 Organism: Escherichia coli strain ETEC1720 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY31_RS11205 (2285567) | 2285567..2286787 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| QDY31_RS11210 (2286912) | 2286912..2287607 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| QDY31_RS11215 (2287560) | 2287560..2288852 | - | 1293 | WP_196010830.1 | voltage-gated ClC-type chloride channel ClcB | - |
| QDY31_RS11220 (2289011) | 2289011..2289625 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| QDY31_RS11225 (2289668) | 2289668..2290522 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| QDY31_RS11230 (2290524) | 2290524..2291141 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| QDY31_RS11235 (2291152) | 2291152..2293575 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDY31_RS11240 (2293636) | 2293636..2296062 | - | 2427 | WP_000041674.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDY31_RS11245 (2296261) | 2296261..2296566 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| QDY31_RS11250 (2296674) | 2296674..2297384 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QDY31_RS11255 (2297387) | 2297387..2297947 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QDY31_RS11260 (2297982) | 2297982..2298323 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QDY31_RS11265 (2298458) | 2298458..2298784 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QDY31_RS11270 (2298990) | 2298990..2300204 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QDY31_RS11275 (2300216) | 2300216..2300545 | + | 330 | Protein_2205 | alcohol dehydrogenase catalytic domain-containing protein | - |
| QDY31_RS11280 (2300690) | 2300690..2301670 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| QDY31_RS11285 (2301739) | 2301739..2302434 | + | 696 | Protein_2207 | Zn-dependent oxidoreductase | - |
| QDY31_RS11290 (2302573) | 2302573..2303270 | + | 698 | WP_282835936.1 | IS1 family transposase IS1X2 | Transposase |
| QDY31_RS11295 (2303287) | 2303287..2303538 | + | 252 | Protein_2209 | DUF977 family protein | - |
| QDY31_RS11300 (2303535) | 2303535..2304024 | + | 490 | Protein_2210 | class I SAM-dependent methyltransferase | - |
| QDY31_RS11305 (2304502) | 2304502..2304923 | + | 422 | Protein_2211 | hypothetical protein | - |
| QDY31_RS11310 (2305579) | 2305579..2306649 | + | 1071 | Protein_2212 | ISNCY family transposase ISCARN112 | Transposase |
| QDY31_RS11315 (2306722) | 2306722..2306871 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDY31_RS11320 (2307308) | 2307308..2307640 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QDY31_RS11325 (2307843) | 2307843..2308148 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDY31_RS11330 (2308173) | 2308173..2308412 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDY31_RS11335 (2308412) | 2308412..2308699 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDY31_RS11340 (2308771) | 2308771..2308926 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDY31_RS11345 (2309143) | 2309143..2309394 | + | 252 | WP_000980999.1 | protein Rem | - |
| QDY31_RS11350 (2309461) | 2309461..2309739 | + | 279 | WP_023147795.1 | hypothetical protein | - |
| QDY31_RS11355 (2309741) | 2309741..2310790 | + | 1050 | WP_196010922.1 | DUF968 domain-containing protein | - |
| QDY31_RS11360 (2310808) | 2310808..2311185 | + | 378 | WP_196010923.1 | antiterminator Q family protein | - |
| QDY31_RS11365 (2311341) | 2311341..2311865 | - | 525 | WP_000780584.1 | lipocalin family protein | - |
| QDY31_RS11370 (2312058) | 2312058..2313017 | + | 960 | WP_000592549.1 | DUF523 and DUF1722 domain-containing protein | - |
| QDY31_RS11375 (2313424) | 2313424..2314137 | + | 714 | WP_024168019.1 | HTH-type transcriptional regulator GadW | VF |
| QDY31_RS11380 (2314328) | 2314328..2314543 | + | 216 | WP_000839587.1 | phage lysis protein EssD | - |
| QDY31_RS11385 (2314548) | 2314548..2314892 | + | 345 | WP_000192451.1 | YdfR family protein | - |
| QDY31_RS11390 (2314858) | 2314858..2315130 | - | 273 | WP_000370545.1 | hypothetical protein | - |
| QDY31_RS11395 (2315236) | 2315236..2315778 | + | 543 | WP_001101168.1 | lysozyme | - |
| QDY31_RS11400 (2315775) | 2315775..2316311 | + | 537 | WP_000700651.1 | hypothetical protein | - |
| QDY31_RS11405 (2316480) | 2316480..2317172 | - | 693 | WP_000085744.1 | hypothetical protein | - |
| QDY31_RS11410 (2317744) | 2317744..2318238 | + | 495 | WP_097737430.1 | DUF1441 family protein | - |
| QDY31_RS11415 (2318238) | 2318238..2320340 | + | 2103 | WP_023909761.1 | phage terminase large subunit family protein | - |
| QDY31_RS11420 (2320337) | 2320337..2320549 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| QDY31_RS11425 (2320477) | 2320477..2322057 | + | 1581 | WP_023908451.1 | phage portal protein | - |
| QDY31_RS11430 (2322002) | 2322002..2324029 | + | 2028 | WP_001533272.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| QDY31_RS11435 (2324116) | 2324116..2324439 | + | 324 | WP_001097045.1 | DUF2190 family protein | - |
| QDY31_RS11440 (2324432) | 2324432..2324707 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| QDY31_RS11445 (2324719) | 2324719..2325297 | + | 579 | WP_097737431.1 | phage tail protein | - |
| QDY31_RS11450 (2325294) | 2325294..2325653 | + | 360 | WP_105462269.1 | phage minor tail U family protein | - |
| QDY31_RS11455 (2325706) | 2325706..2326449 | + | 744 | WP_001533270.1 | phage tail protein | - |
| QDY31_RS11460 (2326510) | 2326510..2326896 | + | 387 | WP_001564671.1 | phage minor tail protein G | - |
| QDY31_RS11465 (2326905) | 2326905..2327234 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| QDY31_RS11470 (2327206) | 2327206..2330271 | + | 3066 | WP_196010924.1 | phage tail tape measure protein | - |
| QDY31_RS11475 (2330271) | 2330271..2330600 | + | 330 | WP_000447253.1 | phage tail protein | - |
| QDY31_RS11480 (2330610) | 2330610..2331308 | + | 699 | WP_001533266.1 | phage minor tail protein L | - |
| QDY31_RS11485 (2331314) | 2331314..2332057 | + | 744 | WP_032157901.1 | C40 family peptidase | - |
| QDY31_RS11490 (2331955) | 2331955..2332602 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| QDY31_RS11495 (2332663) | 2332663..2336076 | + | 3414 | WP_047621258.1 | host specificity protein J | - |
| QDY31_RS11500 (2336147) | 2336147..2336746 | + | 600 | WP_001230523.1 | Outer membrane protein X | VF |
| QDY31_RS11505 (2336811) | 2336811..2339774 | + | 2964 | WP_001533262.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QDY31_RS11510 (2339774) | 2339774..2340349 | + | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| QDY31_RS11515 (2340447) | 2340447..2341037 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDY31_RS11520 (2341354) | 2341354..2341587 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDY31_RS11525 (2341656) | 2341656..2341769 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QDY31_RS11530 (2342373) | 2342373..2343656 | + | 1284 | Protein_2256 | MHS family MFS transporter YdfJ | - |
| QDY31_RS11535 (2343745) | 2343745..2345205 | + | 1461 | WP_063091469.1 | mannitol dehydrogenase family protein | - |
| QDY31_RS11540 (2345240) | 2345240..2345443 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDY31_RS11545 (2345620) | 2345620..2346306 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDY31_RS11550 (2346395) | 2346395..2347141 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|