MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98832 bp
Accession: NZ_CP122848 Location: 1..98832 Organism: Escherichia coli strain ETEC1722 Replicon: plasmid unnamed4
Accession: NZ_CP122848 Location: 1..98832 Organism: Escherichia coli strain ETEC1722 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX00_RS23870 (QDX00_23870) | 1..282 | + | 282 | WP_000332809.1 | phage holin family protein | - |
| QDX00_RS23875 (QDX00_23875) | 350..679 | + | 330 | WP_000887652.1 | phage holin family protein | - |
| QDX00_RS23880 (QDX00_23880) | 676..1119 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| QDX00_RS23885 (QDX00_23885) | 1106..1708 | + | 603 | WP_002433476.1 | hypothetical protein | - |
| QDX00_RS23890 (QDX00_23890) | 1710..3629 | + | 1920 | WP_047616118.1 | hypothetical protein | - |
| QDX00_RS23895 (QDX00_23895) | 3626..3991 | + | 366 | WP_000175488.1 | hypothetical protein | - |
| QDX00_RS23900 (QDX00_23900) | 4046..5692 | + | 1647 | Protein_6 | hypothetical protein | - |
| QDX00_RS23905 (QDX00_23905) | 5682..5993 | + | 312 | WP_001165932.1 | hypothetical protein | - |
| QDX00_RS23910 (QDX00_23910) | 6735..7847 | + | 1113 | WP_000724558.1 | porin OmpC | - |
| QDX00_RS23915 (QDX00_23915) | 8081..8569 | - | 489 | WP_000068862.1 | single-stranded DNA-binding protein | - |
| QDX00_RS23920 (QDX00_23920) | 8739..9296 | + | 558 | WP_282836018.1 | lysozyme | - |
| QDX00_RS23925 (QDX00_23925) | 9325..9540 | + | 216 | WP_172944668.1 | holin | - |
| QDX00_RS23930 (QDX00_23930) | 9588..10607 | - | 1020 | WP_000132938.1 | head processing protein | - |
| QDX00_RS23935 (QDX00_23935) | 10600..12309 | - | 1710 | WP_024200402.1 | hypothetical protein | - |
| QDX00_RS23940 (QDX00_23940) | 12385..19152 | + | 6768 | WP_032163771.1 | N-6 DNA methylase | - |
| QDX00_RS23945 (QDX00_23945) | 19186..19626 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| QDX00_RS23950 (QDX00_23950) | 19623..19871 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| QDX00_RS23955 (QDX00_23955) | 19913..21217 | - | 1305 | WP_000006034.1 | SIR2 family protein | - |
| QDX00_RS23960 (QDX00_23960) | 21274..21915 | - | 642 | WP_001376241.1 | hypothetical protein | - |
| QDX00_RS23965 (QDX00_23965) | 22103..22243 | - | 141 | Protein_19 | Ref family recombination enhancement nuclease | - |
| QDX00_RS23970 (QDX00_23970) | 22276..25281 | - | 3006 | WP_264865660.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QDX00_RS23975 (QDX00_23975) | 25443..26000 | + | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDX00_RS23980 (QDX00_23980) | 26183..27043 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QDX00_RS23985 (QDX00_23985) | 27666..28112 | + | 447 | Protein_23 | transposase | - |
| QDX00_RS23990 (QDX00_23990) | 28094..28495 | + | 402 | Protein_24 | DUF3363 domain-containing protein | - |
| QDX00_RS23995 (QDX00_23995) | 28712..29926 | + | 1215 | WP_062896568.1 | Bicyclomycin resistance protein | ARG |
| QDX00_RS24000 (QDX00_24000) | 29954..30091 | + | 138 | Protein_26 | LysR family transcriptional regulator | - |
| QDX00_RS24005 (QDX00_24005) | 30132..30557 | - | 426 | Protein_27 | Ref family recombination enhancement nuclease | - |
| QDX00_RS24010 (QDX00_24010) | 30805..31116 | - | 312 | WP_001224236.1 | hypothetical protein | - |
| QDX00_RS24015 (QDX00_24015) | 31167..32198 | - | 1032 | WP_000067530.1 | site-specific integrase | - |
| QDX00_RS24020 (QDX00_24020) | 32206..32427 | - | 222 | WP_000542385.1 | hypothetical protein | - |
| QDX00_RS24025 (QDX00_24025) | 33032..33241 | + | 210 | WP_000874152.1 | hypothetical protein | - |
| QDX00_RS24030 (QDX00_24030) | 33352..34203 | + | 852 | WP_000611663.1 | phage repressor protein C1 | - |
| QDX00_RS24035 (QDX00_24035) | 34228..35712 | - | 1485 | WP_000124150.1 | terminase | - |
| QDX00_RS24040 (QDX00_24040) | 35712..36905 | - | 1194 | WP_047649469.1 | hypothetical protein | - |
| QDX00_RS24045 (QDX00_24045) | 36991..37443 | - | 453 | WP_016231381.1 | hypothetical protein | - |
| QDX00_RS24050 (QDX00_24050) | 37532..38575 | - | 1044 | WP_047649471.1 | DUF968 domain-containing protein | - |
| QDX00_RS24055 (QDX00_24055) | 38603..38782 | - | 180 | WP_000113018.1 | hypothetical protein | - |
| QDX00_RS24060 (QDX00_24060) | 38787..39167 | - | 381 | WP_001216030.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QDX00_RS24065 (QDX00_24065) | 39167..39388 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QDX00_RS24070 (QDX00_24070) | 39571..41127 | + | 1557 | WP_282836031.1 | type I restriction-modification system subunit M | - |
| QDX00_RS24075 (QDX00_24075) | 41124..42257 | + | 1134 | WP_282836025.1 | restriction endonuclease subunit S | - |
| QDX00_RS24080 (QDX00_24080) | 42379..45495 | + | 3117 | WP_282836027.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QDX00_RS24085 (QDX00_24085) | 45574..45708 | - | 135 | WP_001312275.1 | hypothetical protein | - |
| QDX00_RS24090 (QDX00_24090) | 45759..46265 | - | 507 | WP_000021759.1 | hypothetical protein | - |
| QDX00_RS24095 (QDX00_24095) | 46338..47600 | - | 1263 | WP_000107691.1 | hypothetical protein | - |
| QDX00_RS24100 (QDX00_24100) | 47902..48603 | - | 702 | WP_000684845.1 | hypothetical protein | - |
| QDX00_RS24105 (QDX00_24105) | 48600..49277 | - | 678 | WP_047649476.1 | metallophosphoesterase | - |
| QDX00_RS24110 (QDX00_24110) | 49274..49810 | - | 537 | WP_236493991.1 | hypothetical protein | - |
| QDX00_RS24115 (QDX00_24115) | 49798..50298 | - | 501 | WP_023153720.1 | hypothetical protein | - |
| QDX00_RS24120 (QDX00_24120) | 50402..50557 | - | 156 | WP_047649479.1 | hypothetical protein | - |
| QDX00_RS24125 (QDX00_24125) | 50624..51202 | - | 579 | WP_047649481.1 | VRR-NUC domain-containing protein | - |
| QDX00_RS24130 (QDX00_24130) | 51205..51450 | - | 246 | WP_032163781.1 | hypothetical protein | - |
| QDX00_RS24135 (QDX00_24135) | 51597..51974 | + | 378 | WP_000235786.1 | hypothetical protein | - |
| QDX00_RS24140 (QDX00_24140) | 51984..53201 | + | 1218 | WP_001141901.1 | hypothetical protein | - |
| QDX00_RS24145 (QDX00_24145) | 53205..53933 | + | 729 | WP_000896806.1 | hypothetical protein | - |
| QDX00_RS24150 (QDX00_24150) | 53920..54705 | + | 786 | WP_000602713.1 | hypothetical protein | - |
| QDX00_RS24155 (QDX00_24155) | 54707..55723 | + | 1017 | WP_000212018.1 | hypothetical protein | - |
| QDX00_RS24160 (QDX00_24160) | 55716..56348 | + | 633 | WP_000535208.1 | hypothetical protein | - |
| QDX00_RS24165 (QDX00_24165) | 56395..57393 | - | 999 | WP_001198667.1 | hypothetical protein | - |
| QDX00_RS24170 (QDX00_24170) | 57393..58757 | - | 1365 | WP_282835998.1 | replicative DNA helicase | - |
| QDX00_RS24180 (QDX00_24180) | 59225..59389 | - | 165 | WP_000234829.1 | DUF3927 family protein | - |
| QDX00_RS24185 (QDX00_24185) | 59389..59814 | - | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| QDX00_RS24200 (QDX00_24200) | 61373..64414 | - | 3042 | WP_282836001.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| QDX00_RS24205 (QDX00_24205) | 64411..65316 | - | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| QDX00_RS24210 (QDX00_24210) | 65309..65593 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| QDX00_RS24215 (QDX00_24215) | 66055..66843 | + | 789 | WP_000890206.1 | hypothetical protein | - |
| QDX00_RS24220 (QDX00_24220) | 66883..67305 | + | 423 | WP_000007765.1 | hypothetical protein | - |
| QDX00_RS24225 (QDX00_24225) | 67340..67471 | + | 132 | WP_001113883.1 | hypothetical protein | - |
| QDX00_RS24230 (QDX00_24230) | 67483..67875 | + | 393 | WP_001281114.1 | hypothetical protein | - |
| QDX00_RS24235 (QDX00_24235) | 68193..69053 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| QDX00_RS24240 (QDX00_24240) | 69611..70807 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| QDX00_RS24245 (QDX00_24245) | 70824..71825 | + | 1002 | WP_000038866.1 | ParB family protein | - |
| QDX00_RS24250 (QDX00_24250) | 72051..73757 | + | 1707 | WP_063119529.1 | hypothetical protein | - |
| QDX00_RS24255 (QDX00_24255) | 73818..75407 | + | 1590 | WP_032163788.1 | hypothetical protein | - |
| QDX00_RS24260 (QDX00_24260) | 75417..76232 | + | 816 | WP_000041763.1 | hypothetical protein | - |
| QDX00_RS24265 (QDX00_24265) | 76268..76849 | + | 582 | WP_000035301.1 | hypothetical protein | - |
| QDX00_RS24270 (QDX00_24270) | 76861..77370 | + | 510 | WP_001615627.1 | hypothetical protein | - |
| QDX00_RS24275 (QDX00_24275) | 77530..78641 | + | 1112 | Protein_78 | IS4 family transposase IS186B | Transposase |
| QDX00_RS24280 (QDX00_24280) | 78835..78990 | - | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| QDX00_RS24285 (QDX00_24285) | 79172..79417 | - | 246 | WP_001369095.1 | hypothetical protein | - |
| QDX00_RS24290 (QDX00_24290) | 79468..80313 | - | 846 | WP_063119477.1 | helix-turn-helix domain-containing protein | - |
| QDX00_RS24295 (QDX00_24295) | 80343..81143 | - | 801 | WP_096179601.1 | phage antirepressor KilAC domain-containing protein | - |
| QDX00_RS24300 (QDX00_24300) | 81307..82080 | - | 774 | WP_096179600.1 | phage antirepressor KilAC domain-containing protein | - |
| QDX00_RS24305 (QDX00_24305) | 82130..82827 | + | 698 | WP_223367350.1 | IS1 family transposase | - |
| QDX00_RS24310 (QDX00_24310) | 83006..83572 | + | 567 | WP_063119474.1 | hypothetical protein | - |
| QDX00_RS24315 (QDX00_24315) | 83583..84194 | + | 612 | WP_000523980.1 | hypothetical protein | - |
| QDX00_RS24320 (QDX00_24320) | 84209..85090 | + | 882 | WP_063119473.1 | hypothetical protein | - |
| QDX00_RS24325 (QDX00_24325) | 85172..88861 | + | 3690 | WP_096249195.1 | transglycosylase SLT domain-containing protein | - |
| QDX00_RS24330 (QDX00_24330) | 88861..89217 | + | 357 | WP_033553797.1 | hypothetical protein | - |
| QDX00_RS24335 (QDX00_24335) | 89214..90647 | + | 1434 | WP_063119472.1 | hypothetical protein | - |
| QDX00_RS24340 (QDX00_24340) | 90647..91483 | + | 837 | WP_001189838.1 | hypothetical protein | - |
| QDX00_RS24345 (QDX00_24345) | 91562..91996 | + | 435 | WP_001286326.1 | hypothetical protein | - |
| QDX00_RS24350 (QDX00_24350) | 92008..95148 | + | 3141 | WP_282836012.1 | tail fiber protein | - |
| QDX00_RS24355 (QDX00_24355) | 95151..95684 | + | 534 | WP_001164135.1 | tail fiber assembly protein | - |
| QDX00_RS24360 (QDX00_24360) | 95712..96239 | - | 528 | WP_001164101.1 | tail fiber assembly protein | - |
| QDX00_RS24365 (QDX00_24365) | 96244..98097 | - | 1854 | WP_064745292.1 | hypothetical protein | - |
| QDX00_RS24370 (QDX00_24370) | 98145..98705 | - | 561 | WP_000905119.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|