MGE detailed information
MGE type: IScluster/Tn MGE length: 23466 bp
Accession: NZ_CP122834 Location: 15354..38819 Organism: Escherichia coli strain ETEC1730 Replicon: plasmid unnamed2
Accession: NZ_CP122834 Location: 15354..38819 Organism: Escherichia coli strain ETEC1730 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY27_RS25805 (10438) | 10438..10794 | + | 357 | WP_282843565.1 | hypothetical protein | - |
| QDY27_RS25810 (10787) | 10787..10975 | + | 189 | WP_227432181.1 | hypothetical protein | - |
| QDY27_RS25815 (11013) | 11013..14900 | + | 3888 | WP_032084850.1 | S6 family peptidase | - |
| QDY27_RS25820 (15038) | 15038..15223 | - | 186 | Protein_19 | IS256 family transposase | - |
| QDY27_RS25825 (15354) | 15354..15767 | - | 414 | Protein_20 | IS66 family transposase IS679 | Transposase |
| QDY27_RS25830 (15954) | 15954..17489 | + | 1536 | WP_094336152.1 | IS21 family transposase ISSso4 | Transposase |
| QDY27_RS25835 (17506) | 17506..18261 | + | 756 | WP_047612444.1 | IS21 family transposase ISSso4 | Transposase |
| QDY27_RS25840 (18357) | 18357..19523 | - | 1167 | Protein_23 | IS66 family transposase ISCro1 | Transposase |
| QDY27_RS25845 (19543) | 19543..19890 | - | 348 | WP_213833996.1 | IS66 family transposase ISCro1 | Transposase |
| QDY27_RS25850 (19890) | 19890..20024 | - | 135 | Protein_25 | IS66 family insertion sequence element accessory protein TnpB | - |
| QDY27_RS25855 (20213) | 20213..21400 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDY27_RS25860 (21400) | 21400..21765 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDY27_RS25865 (21866) | 21866..22369 | - | 504 | Protein_28 | IS66 family transposase IS679 | Transposase |
| - (22970) | 22970..23031 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (22970) | 22970..23031 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (22970) | 22970..23031 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (22970) | 22970..23031 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| QDY27_RS25870 (23075) | 23075..23224 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| QDY27_RS25875 (23508) | 23508..23765 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| QDY27_RS25880 (23999) | 23999..24073 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| QDY27_RS25885 (24066) | 24066..24548 | + | 483 | WP_001523473.1 | hypothetical protein | - |
| QDY27_RS25890 (24541) | 24541..25398 | + | 858 | WP_032084499.1 | incFII family plasmid replication initiator RepA | - |
| QDY27_RS25895 (26311) | 26311..26595 | + | 285 | WP_032084498.1 | ribbon-helix-helix protein, CopG family | - |
| QDY27_RS25900 (26595) | 26595..26780 | + | 186 | Protein_35 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDY27_RS25905 (26854) | 26854..27636 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| QDY27_RS25910 (27633) | 27633..28655 | - | 1023 | WP_000255956.1 | IS21 family transposase IS100kyp | Transposase |
| QDY27_RS25915 (28743) | 28743..28835 | + | 93 | Protein_38 | antirestriction protein | - |
| QDY27_RS25920 (28849) | 28849..29481 | + | 633 | Protein_39 | IS481 family transposase ISErsp1 | Transposase |
| QDY27_RS25925 (29705) | 29705..29908 | + | 204 | Protein_40 | IS3 family transposase | - |
| QDY27_RS25930 (29968) | 29968..30474 | - | 507 | WP_024185287.1 | thiol peroxidase | - |
| QDY27_RS25935 (30946) | 30946..31280 | + | 335 | Protein_42 | IS3 family transposase ISEc17 | Transposase |
| QDY27_RS25940 (31469) | 31469..32656 | - | 1188 | WP_282840307.1 | IS91 family transposase IS91 | Transposase |
| QDY27_RS25945 (32656) | 32656..33021 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| QDY27_RS25950 (33110) | 33110..33937 | + | 828 | Protein_45 | IS3 family transposase ISEc17 | Transposase |
| QDY27_RS25955 (34602) | 34602..35440 | - | 839 | Protein_46 | IS3 family transposase ISRaq1 | Transposase |
| QDY27_RS25960 (35518) | 35518..36420 | - | 903 | Protein_47 | IS3 family transposase ISLad1 | Transposase |
| QDY27_RS25965 (36411) | 36411..36491 | + | 81 | Protein_48 | hypothetical protein | - |
| QDY27_RS25970 (36488) | 36488..37639 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| QDY27_RS25975 (37652) | 37652..37909 | - | 258 | Protein_50 | IS3 family transposase IS911 | Transposase |
| QDY27_RS25980 (37982) | 37982..38068 | + | 87 | Protein_51 | phage integrase family protein | - |
| QDY27_RS25990 (39130) | 39130..39687 | + | 558 | WP_282843566.1 | helix-turn-helix transcriptional regulator | - |
| QDY27_RS25995 (40197) | 40197..40787 | - | 591 | WP_274536978.1 | hypothetical protein | - |
| QDY27_RS26000 (41411) | 41411..41926 | - | 516 | WP_032084303.1 | hypothetical protein | - |
| QDY27_RS26005 (41913) | 41913..42605 | - | 693 | WP_032084304.1 | fimbrial chaperone | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|