MGE detailed information
MGE type: Prophage MGE length: 68299 bp
Accession: NZ_CP122832 Location: 3951511..4019809 Organism: Escherichia coli strain ETEC1730 Replicon: chromosome
Accession: NZ_CP122832 Location: 3951511..4019809 Organism: Escherichia coli strain ETEC1730 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY27_RS19835 (3947345) | 3947345..3949543 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| QDY27_RS19840 (3949553) | 3949553..3950509 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| QDY27_RS19845 (3950560) | 3950560..3950898 | + | 339 | Protein_3884 | LysR substrate-binding domain-containing protein | - |
| QDY27_RS19850 (3951511) | 3951511..3954321 | + | 2811 | WP_282843371.1 | SIR2 family protein | - |
| QDY27_RS19855 (3954542) | 3954542..3955006 | - | 465 | Protein_3886 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QDY27_RS19860 (3955076) | 3955076..3955183 | - | 108 | Protein_3887 | tail fiber assembly protein | - |
| QDY27_RS19865 (3955185) | 3955185..3955607 | - | 423 | Protein_3888 | prophage tail fiber N-terminal domain-containing protein | - |
| QDY27_RS19870 (3955672) | 3955672..3956109 | - | 438 | Protein_3889 | hypothetical protein | VF |
| QDY27_RS19875 (3956106) | 3956106..3956231 | - | 126 | Protein_3890 | head decoration protein | - |
| QDY27_RS19880 (3956241) | 3956241..3957560 | - | 1320 | WP_032192632.1 | S49 family peptidase | - |
| QDY27_RS19885 (3957541) | 3957541..3959040 | - | 1500 | Protein_3892 | phage portal protein | - |
| QDY27_RS19890 (3959038) | 3959038..3959544 | - | 507 | Protein_3893 | DNA-packaging protein | - |
| QDY27_RS19895 (3960251) | 3960251..3961258 | - | 1008 | WP_032192729.1 | mechanosensitive ion channel family protein | - |
| QDY27_RS19900 (3961776) | 3961776..3962321 | - | 546 | WP_023141107.1 | glycosyl hydrolase 108 family protein | - |
| QDY27_RS19905 (3962323) | 3962323..3962601 | - | 279 | WP_023141108.1 | phage holin family protein | - |
| QDY27_RS19910 (3962591) | 3962591..3962980 | - | 390 | WP_024175740.1 | putative holin | - |
| QDY27_RS19915 (3963078) | 3963078..3963230 | - | 153 | WP_032192723.1 | DUF3927 family protein | - |
| QDY27_RS19920 (3963227) | 3963227..3963652 | - | 426 | WP_024175741.1 | tellurite resistance TerB family protein | - |
| QDY27_RS19935 (3964915) | 3964915..3965976 | - | 1062 | WP_282843372.1 | site-specific DNA-methyltransferase | - |
| QDY27_RS19940 (3965988) | 3965988..3967208 | - | 1221 | WP_032084458.1 | ISL3 family transposase ISKox3 | Transposase |
| QDY27_RS19945 (3967447) | 3967447..3967641 | - | 195 | WP_032192725.1 | hypothetical protein | - |
| QDY27_RS19950 (3968215) | 3968215..3969312 | + | 1098 | WP_032192726.1 | porin | - |
| QDY27_RS19955 (3969500) | 3969500..3969883 | - | 384 | WP_032192727.1 | antiterminator Q family protein | - |
| QDY27_RS19960 (3969901) | 3969901..3970890 | - | 990 | WP_112842766.1 | DUF968 domain-containing protein | - |
| QDY27_RS19965 (3970898) | 3970898..3971695 | - | 798 | WP_061355895.1 | KilA-N domain-containing protein | - |
| QDY27_RS19970 (3971715) | 3971715..3971897 | - | 183 | Protein_3907 | RusA family crossover junction endodeoxyribonuclease | - |
| QDY27_RS19975 (3971899) | 3971899..3971970 | - | 72 | Protein_3908 | serine/threonine protein phosphatase | - |
| QDY27_RS19980 (3971948) | 3971948..3972154 | - | 207 | WP_000144614.1 | phage NinH family protein | - |
| QDY27_RS19985 (3972151) | 3972151..3972543 | - | 393 | Protein_3910 | recombination protein NinG | - |
| QDY27_RS19990 (3972542) | 3972542..3972955 | + | 414 | Protein_3911 | single-stranded DNA-binding protein | - |
| QDY27_RS19995 (3972969) | 3972969..3973262 | + | 294 | WP_001111335.1 | DUF2856 family protein | - |
| QDY27_RS20000 (3973273) | 3973273..3973437 | + | 165 | WP_001214436.1 | DUF2737 family protein | - |
| QDY27_RS20005 (3973434) | 3973434..3973991 | + | 558 | WP_112910419.1 | hypothetical protein | - |
| QDY27_RS20010 (3973988) | 3973988..3974287 | + | 300 | WP_094336379.1 | hypothetical protein | - |
| QDY27_RS20015 (3974289) | 3974289..3974912 | + | 624 | WP_094336380.1 | ead/Ea22-like family protein | - |
| QDY27_RS20020 (3975104) | 3975104..3975385 | + | 282 | WP_000026224.1 | hypothetical protein | - |
| QDY27_RS20025 (3975474) | 3975474..3975641 | + | 168 | WP_053291265.1 | hypothetical protein | - |
| QDY27_RS20030 (3975990) | 3975990..3976337 | + | 348 | WP_072001840.1 | helix-turn-helix domain-containing protein | - |
| QDY27_RS20035 (3976220) | 3976220..3977374 | + | 1155 | WP_239912911.1 | hypothetical protein ; Integrase | Integrase |
| QDY27_RS20045 (3977579) | 3977579..3978832 | - | 1254 | WP_094336259.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QDY27_RS20050 (3978844) | 3978844..3979947 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QDY27_RS20055 (3980235) | 3980235..3981290 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| QDY27_RS20060 (3981329) | 3981329..3981730 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3982448) | 3982448..3982528 | - | 81 | NuclAT_12 | - | - |
| - (3982448) | 3982448..3982528 | - | 81 | NuclAT_12 | - | - |
| - (3982448) | 3982448..3982528 | - | 81 | NuclAT_12 | - | - |
| - (3982448) | 3982448..3982528 | - | 81 | NuclAT_12 | - | - |
| QDY27_RS20065 (3981788) | 3981788..3983032 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| QDY27_RS20070 (3983124) | 3983124..3983582 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| QDY27_RS20075 (3983843) | 3983843..3985300 | + | 1458 | WP_032187154.1 | cytosol nonspecific dipeptidase | - |
| QDY27_RS20080 (3985357) | 3985357..3985878 | - | 522 | Protein_3928 | peptide chain release factor H | - |
| QDY27_RS20085 (3985877) | 3985877..3986080 | - | 204 | Protein_3929 | RtcB family protein | - |
| QDY27_RS20090 (3986326) | 3986326..3986778 | - | 453 | WP_001059873.1 | GNAT family N-acetyltransferase | - |
| QDY27_RS20095 (3986775) | 3986775..3987830 | - | 1056 | WP_001226178.1 | DNA polymerase IV | - |
| QDY27_RS20100 (3987901) | 3987901..3988686 | - | 786 | WP_000207556.1 | hypothetical protein | VF |
| QDY27_RS20105 (3988658) | 3988658..3990370 | + | 1713 | Protein_3933 | hypothetical protein | VF |
| QDY27_RS20110 (3990502) | 3990502..3990999 | - | 498 | WP_000006245.1 | REP-associated tyrosine transposase RayT | - |
| QDY27_RS20115 (3991175) | 3991175..3991948 | - | 774 | WP_000543885.1 | hypothetical protein | VF |
| QDY27_RS20120 (3992134) | 3992134..3992394 | + | 261 | WP_000729707.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| QDY27_RS20125 (3992397) | 3992397..3992675 | + | 279 | WP_000615980.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| QDY27_RS20130 (3992831) | 3992831..3993571 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QDY27_RS20135 (3993542) | 3993542..3994309 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| QDY27_RS20140 (3994515) | 3994515..3995093 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| QDY27_RS20145 (3995333) | 3995333..3997777 | + | 2445 | WP_094336257.1 | hypothetical protein | VF |
| QDY27_RS20150 (3997820) | 3997820..3998266 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| QDY27_RS20155 (3998447) | 3998447..3999214 | + | 768 | WP_001118025.1 | 2-oxoglutaramate amidase | - |
| QDY27_RS20160 (3999274) | 3999274..3999642 | - | 369 | Protein_3944 | ISAs1 family transposase ISEc1 | Transposase |
| QDY27_RS20165 (3999886) | 3999886..4000266 | - | 381 | WP_231436514.1 | hypothetical protein | - |
| QDY27_RS20170 (4000269) | 4000269..4000964 | - | 696 | WP_232379228.1 | hypothetical protein | VF |
| QDY27_RS20175 (4001061) | 4001061..4001132 | - | 72 | Protein_3947 | hypothetical protein | VF |
| QDY27_RS20180 (4001157) | 4001157..4001543 | - | 387 | WP_000667624.1 | hypothetical protein | - |
| QDY27_RS20185 (4001540) | 4001540..4002241 | - | 702 | WP_282843375.1 | hypothetical protein | - |
| QDY27_RS20190 (4002457) | 4002457..4003347 | - | 891 | Protein_3950 | hypothetical protein | VF |
| QDY27_RS20195 (4003330) | 4003330..4004073 | + | 744 | Protein_3951 | cytoplasmic protein | - |
| QDY27_RS20205 (4004414) | 4004414..4005145 | - | 732 | WP_282843376.1 | DNA polymerase III subunit epsilon | - |
| QDY27_RS20210 (4005210) | 4005210..4005677 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| QDY27_RS20215 (4005674) | 4005674..4006396 | - | 723 | WP_001307587.1 | class I SAM-dependent methyltransferase | - |
| QDY27_RS20220 (4006430) | 4006430..4007185 | + | 756 | WP_001052752.1 | hydroxyacylglutathione hydrolase | - |
| QDY27_RS20225 (4007257) | 4007257..4008615 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| QDY27_RS20230 (4008663) | 4008663..4009432 | - | 770 | Protein_3957 | class I SAM-dependent methyltransferase | - |
| QDY27_RS20235 (4009510) | 4009510..4010310 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| QDY27_RS20240 (4010551) | 4010551..4011465 | + | 915 | WP_000648565.1 | hypothetical protein | VF |
| QDY27_RS20245 (4011462) | 4011462..4012265 | - | 804 | WP_000997024.1 | 2,5-didehydrogluconate reductase DkgB | - |
| QDY27_RS20280 (4018015) | 4018015..4018590 | - | 576 | WP_001140165.1 | hypothetical protein | VF |
| QDY27_RS20285 (4018778) | 4018778..4019809 | + | 1032 | WP_000593994.1 | hypothetical protein | VF |
| QDY27_RS20290 (4019802) | 4019802..4020455 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| QDY27_RS20295 (4020495) | 4020495..4021310 | + | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| QDY27_RS20300 (4021428) | 4021428..4021832 | + | 405 | WP_001202324.1 | Rcs stress response system protein RcsF | - |
| QDY27_RS20305 (4021829) | 4021829..4022536 | + | 708 | WP_000094019.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| QDY27_RS20310 (4022647) | 4022647..4024365 | + | 1719 | WP_001260716.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|