MGE detailed information
MGE type: IScluster/Tn MGE length: 25617 bp
Accession: NZ_CP122817 Location: 14824..40440 Organism: Escherichia coli strain ETEC1731 Replicon: plasmid unnamed1
Accession: NZ_CP122817 Location: 14824..40440 Organism: Escherichia coli strain ETEC1731 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY29_RS24285 (11859) | 11859..12602 | + | 744 | WP_000205703.1 | conjugal transfer pilus acetylase TraX | - |
| QDY29_RS24290 (12657) | 12657..13217 | + | 561 | WP_000139309.1 | fertility inhibition protein FinO | - |
| QDY29_RS24295 (13353) | 13353..13568 | + | 216 | WP_032166857.1 | hypothetical protein | - |
| QDY29_RS24300 (13812) | 13812..13898 | + | 87 | Protein_9 | endonuclease | - |
| QDY29_RS24305 (14079) | 14079..14390 | - | 312 | WP_000765906.1 | hypothetical protein | - |
| - (14686) | 14686..14747 | - | 62 | NuclAT_1 | - | - |
| - (14686) | 14686..14747 | - | 62 | NuclAT_1 | - | - |
| - (14686) | 14686..14747 | - | 62 | NuclAT_1 | - | - |
| - (14686) | 14686..14747 | - | 62 | NuclAT_1 | - | - |
| QDY29_RS24315 (16052) | 16052..16192 | + | 141 | WP_064717426.1 | Hok/Gef family protein | - |
| QDY29_RS24320 (16472) | 16472..16729 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| QDY29_RS24325 (16963) | 16963..17037 | + | 75 | WP_032319616.1 | RepA leader peptide Tap | - |
| QDY29_RS24330 (17030) | 17030..18052 | + | 1023 | WP_000840938.1 | plasmid replication initiator RepA | - |
| QDY29_RS24335 (18968) | 18968..19237 | + | 270 | WP_000079930.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDY29_RS24340 (19237) | 19237..19515 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDY29_RS24345 (19561) | 19561..20290 | + | 730 | Protein_18 | 3'-5' exonuclease | - |
| QDY29_RS24350 (20297) | 20297..20605 | - | 309 | Protein_19 | integrase core domain-containing protein | - |
| QDY29_RS24355 (20622) | 20622..21698 | - | 1077 | WP_000907656.1 | IS110 family transposase ISEc21 | Transposase |
| QDY29_RS24360 (21980) | 21980..22839 | - | 860 | Protein_21 | IS3 family transposase | - |
| QDY29_RS24365 (22953) | 22953..23348 | - | 396 | Protein_22 | ATP-binding protein | - |
| QDY29_RS24370 (23696) | 23696..24070 | - | 375 | WP_015675362.1 | Heat-labile enterotoxin B chain | VF |
| QDY29_RS24375 (24067) | 24067..24843 | - | 777 | WP_042634421.1 | Heat-labile enterotoxin A chain | VF |
| QDY29_RS24380 (25117) | 25117..25321 | - | 205 | Protein_25 | IS110 family transposase | - |
| QDY29_RS24385 (25710) | 25710..26423 | + | 714 | WP_001424997.1 | hypothetical protein | - |
| QDY29_RS24390 (26635) | 26635..27606 | + | 972 | WP_001078349.1 | IS481 family transposase ISEc18 | Transposase |
| QDY29_RS24395 (27698) | 27698..28341 | - | 644 | Protein_28 | DDE-type integrase/transposase/recombinase | - |
| QDY29_RS24400 (28367) | 28367..28946 | + | 580 | Protein_29 | IS256 family transposase | - |
| QDY29_RS24405 (29423) | 29423..29637 | + | 215 | Protein_30 | heat-stable enterotoxin ST-II | - |
| QDY29_RS24410 (30025) | 30025..30868 | + | 844 | Protein_31 | IS3 family transposase | - |
| QDY29_RS24415 (30954) | 30954..31379 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDY29_RS24420 (31376) | 31376..31726 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QDY29_RS24425 (31757) | 31757..33370 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QDY29_RS24430 (33397) | 33397..33675 | + | 279 | Protein_35 | transposase | - |
| QDY29_RS24435 (33791) | 33791..35326 | - | 1536 | WP_001424993.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| QDY29_RS24440 (35394) | 35394..35495 | - | 102 | Protein_37 | restriction endonuclease subunit M | - |
| QDY29_RS24445 (35653) | 35653..35805 | - | 153 | Protein_38 | transposase | - |
| QDY29_RS24450 (35881) | 35881..36644 | + | 764 | Protein_39 | IS3 family transposase IS2 | Transposase |
| QDY29_RS24455 (36672) | 36672..37339 | - | 668 | Protein_40 | IS3 family transposase ISKpn38 | Transposase |
| QDY29_RS24460 (37417) | 37417..37590 | - | 174 | Protein_41 | IS3 family transposase | - |
| QDY29_RS24465 (37789) | 37789..38486 | - | 698 | Protein_42 | IS21 family transposase IS100 | Transposase |
| QDY29_RS24470 (38483) | 38483..39492 | - | 1010 | Protein_43 | IS21 family transposase IS100kyp | Transposase |
| QDY29_RS24475 (39545) | 39545..40644 | + | 1100 | Protein_44 | IS3 family transposase IS3F | Transposase |
| QDY29_RS24480 (40991) | 40991..41314 | - | 324 | WP_230909587.1 | MarR family transcriptional regulator | - |
| QDY29_RS24485 (41363) | 41363..41491 | - | 129 | Protein_46 | transcriptional regulator | - |
| QDY29_RS24490 (41963) | 41963..42205 | - | 243 | WP_050562259.1 | toxin-activating lysine-acyltransferase | - |
| QDY29_RS24495 (42656) | 42656..42765 | + | 110 | Protein_48 | IS5/IS1182 family transposase | - |
| QDY29_RS24500 (43288) | 43288..43538 | + | 251 | Protein_49 | type II toxin-antitoxin system ParD family antitoxin | - |
| QDY29_RS24505 (43525) | 43525..43819 | + | 295 | Protein_50 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDY29_RS24510 (44182) | 44182..44922 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|