MGE detailed information
MGE type: Prophage MGE length: 59126 bp
Accession: NZ_CP122816 Location: 2461174..2520299 Organism: Escherichia coli strain ETEC1731 Replicon: chromosome
Accession: NZ_CP122816 Location: 2461174..2520299 Organism: Escherichia coli strain ETEC1731 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY29_RS12090 (2457423) | 2457423..2459849 | - | 2427 | WP_000041558.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QDY29_RS12095 (2460048) | 2460048..2460353 | - | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| QDY29_RS12100 (2460461) | 2460461..2461171 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QDY29_RS12105 (2461174) | 2461174..2461734 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QDY29_RS12110 (2461769) | 2461769..2462110 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QDY29_RS12115 (2462293) | 2462293..2463521 | + | 1229 | WP_085959875.1 | IS3 family transposase IS2 | Transposase |
| QDY29_RS12120 (2463532) | 2463532..2463699 | - | 168 | Protein_2371 | lysis protein YdfD | - |
| QDY29_RS12125 (2463696) | 2463696..2463884 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDY29_RS12130 (2464845) | 2464845..2464946 | - | 102 | Protein_2373 | protein YdfB | - |
| QDY29_RS12135 (2464948) | 2464948..2465103 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| QDY29_RS12140 (2465295) | 2465295..2465702 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| QDY29_RS12145 (2465780) | 2465780..2466007 | + | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| QDY29_RS12150 (2465991) | 2465991..2466512 | + | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| QDY29_RS12155 (2466493) | 2466493..2467458 | + | 966 | WP_000054506.1 | hypothetical protein | - |
| QDY29_RS12160 (2467499) | 2467499..2467918 | + | 420 | WP_001151195.1 | DUF977 family protein | - |
| QDY29_RS12165 (2467973) | 2467973..2469022 | + | 1050 | Protein_2380 | ISNCY family transposase ISCARN112 | Transposase |
| QDY29_RS12170 (2469143) | 2469143..2469292 | + | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDY29_RS12175 (2469729) | 2469729..2470061 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| QDY29_RS12180 (2470264) | 2470264..2470569 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QDY29_RS12185 (2470594) | 2470594..2470833 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDY29_RS12190 (2470833) | 2470833..2471120 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDY29_RS12195 (2471192) | 2471192..2471347 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDY29_RS12200 (2471564) | 2471564..2471815 | + | 252 | WP_000980994.1 | protein Rem | - |
| QDY29_RS12205 (2471882) | 2471882..2472160 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QDY29_RS12210 (2472162) | 2472162..2473211 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| QDY29_RS12215 (2473225) | 2473225..2473977 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QDY29_RS12220 (2474255) | 2474255..2474344 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QDY29_RS12225 (2474399) | 2474399..2474611 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDY29_RS12230 (2474912) | 2474912..2475127 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDY29_RS12235 (2475491) | 2475491..2475661 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| QDY29_RS12240 (2475881) | 2475881..2476096 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDY29_RS12245 (2476101) | 2476101..2476412 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| QDY29_RS12250 (2476409) | 2476409..2476942 | + | 534 | WP_001092971.1 | lysozyme | - |
| QDY29_RS12255 (2476939) | 2476939..2477436 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDY29_RS12260 (2477799) | 2477799..2478011 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDY29_RS12265 (2478022) | 2478022..2478210 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QDY29_RS12270 (2478213) | 2478213..2478278 | + | 66 | WP_122134696.1 | small protein YnfR | - |
| QDY29_RS12275 (2478283) | 2478283..2478513 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QDY29_RS12280 (2478685) | 2478685..2478858 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDY29_RS12285 (2479010) | 2479010..2479420 | - | 411 | WP_000035574.1 | DUF1398 domain-containing protein | - |
| QDY29_RS12290 (2479721) | 2479721..2479927 | + | 207 | WP_001031431.1 | hypothetical protein | - |
| QDY29_RS12295 (2480508) | 2480508..2481035 | + | 528 | WP_001389340.1 | DUF1441 family protein | - |
| QDY29_RS12300 (2481044) | 2481044..2483143 | + | 2100 | WP_000507032.1 | phage terminase large subunit family protein | - |
| QDY29_RS12305 (2483140) | 2483140..2483352 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| QDY29_RS12310 (2483280) | 2483280..2484827 | + | 1548 | WP_077631397.1 | phage portal protein | - |
| QDY29_RS12315 (2484805) | 2484805..2486832 | + | 2028 | WP_001136599.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| QDY29_RS12320 (2486919) | 2486919..2487242 | + | 324 | WP_001097052.1 | DUF2190 family protein | - |
| QDY29_RS12325 (2487235) | 2487235..2487510 | + | 276 | WP_001283152.1 | DNA breaking-rejoining protein | - |
| QDY29_RS12330 (2487522) | 2487522..2488100 | + | 579 | WP_000677102.1 | phage tail protein | - |
| QDY29_RS12335 (2488097) | 2488097..2488498 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| QDY29_RS12340 (2488509) | 2488509..2489252 | + | 744 | WP_000211131.1 | phage tail protein | - |
| QDY29_RS12345 (2489313) | 2489313..2489699 | + | 387 | WP_001384509.1 | phage minor tail protein G | - |
| QDY29_RS12350 (2489708) | 2489708..2490037 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| QDY29_RS12355 (2490009) | 2490009..2493075 | + | 3067 | Protein_2418 | phage tail tape measure protein | - |
| QDY29_RS12360 (2493075) | 2493075..2493404 | + | 330 | WP_000447253.1 | phage tail protein | - |
| QDY29_RS12365 (2493414) | 2493414..2494112 | + | 699 | WP_001152385.1 | phage minor tail protein L | - |
| QDY29_RS12370 (2494118) | 2494118..2494861 | + | 744 | WP_000194816.1 | C40 family peptidase | - |
| QDY29_RS12375 (2494759) | 2494759..2495406 | + | 648 | WP_023277304.1 | tail assembly protein | - |
| QDY29_RS12380 (2495467) | 2495467..2498865 | + | 3399 | WP_000515631.1 | host specificity protein J | - |
| QDY29_RS12385 (2498932) | 2498932..2499531 | + | 600 | WP_001230352.1 | hypothetical protein | VF |
| QDY29_RS12390 (2499596) | 2499596..2502619 | + | 3024 | WP_024183964.1 | phage tail protein | - |
| QDY29_RS12395 (2502619) | 2502619..2503194 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| QDY29_RS12400 (2503292) | 2503292..2503882 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDY29_RS12405 (2504200) | 2504200..2504433 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDY29_RS12410 (2504502) | 2504502..2504615 | - | 114 | WP_122985608.1 | YnaM/YnfT family protein | - |
| QDY29_RS12415 (2505220) | 2505220..2506503 | + | 1284 | Protein_2430 | MHS family MFS transporter YdfJ | - |
| QDY29_RS12420 (2506592) | 2506592..2508052 | + | 1461 | WP_000527758.1 | mannitol dehydrogenase family protein | - |
| QDY29_RS12425 (2508088) | 2508088..2508291 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDY29_RS12430 (2508469) | 2508469..2509155 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QDY29_RS12435 (2509244) | 2509244..2509990 | - | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| QDY29_RS12440 (2510127) | 2510127..2512172 | + | 2046 | WP_001296767.1 | peptidyl-dipeptidase Dcp | - |
| QDY29_RS12445 (2512217) | 2512217..2512735 | - | 519 | WP_001024561.1 | 2-oxo-tetronate isomerase | - |
| QDY29_RS12450 (2513011) | 2513011..2513403 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| QDY29_RS12455 (2513658) | 2513658..2514548 | + | 891 | WP_000592826.1 | diguanylate cyclase DgcZ | - |
| QDY29_RS12460 (2514663) | 2514663..2514767 | - | 105 | WP_211180496.1 | protein MgtT | - |
| QDY29_RS12465 (2514767) | 2514767..2514862 | - | 96 | WP_000901367.1 | protein MgtS | - |
| QDY29_RS12470 (2514989) | 2514989..2516176 | - | 1188 | WP_001054164.1 | efflux MFS transporter YdeE | - |
| QDY29_RS12475 (2516371) | 2516371..2517270 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| QDY29_RS12480 (2517315) | 2517315..2518013 | - | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
| QDY29_RS12485 (2518212) | 2518212..2518523 | + | 312 | WP_000722571.1 | PTS sugar transporter subunit IIB | - |
| QDY29_RS12490 (2518638) | 2518638..2519960 | + | 1323 | WP_000523802.1 | PTS sugar transporter subunit IIC | - |
| QDY29_RS12495 (2519988) | 2519988..2520299 | + | 312 | WP_001296721.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| QDY29_RS12500 (2520355) | 2520355..2522028 | + | 1674 | WP_001022768.1 | carbohydrate porin | - |
| QDY29_RS12505 (2522053) | 2522053..2523492 | + | 1440 | WP_000012618.1 | 6-phospho-beta-glucosidase | - |
| QDY29_RS12510 (2523549) | 2523549..2523767 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| QDY29_RS12515 (2523799) | 2523799..2524182 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| QDY29_RS12520 (2524202) | 2524202..2524636 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|