MGE detailed information
MGE type: Genomic_island MGE length: 12563 bp
Accession: NZ_CP122768 Location: 5079278..5091840 Organism: Escherichia coli strain ETEC1738 Replicon: chromosome
Accession: NZ_CP122768 Location: 5079278..5091840 Organism: Escherichia coli strain ETEC1738 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY55_RS25440 (5075039) | 5075039..5076070 | - | 1032 | WP_000416157.1 | LacI family DNA-binding transcriptional regulator | - |
| QDY55_RS25445 (5076341) | 5076341..5076784 | + | 444 | WP_000916811.1 | PTS sugar transporter subunit IIA | - |
| QDY55_RS25450 (5076800) | 5076800..5077087 | + | 288 | WP_000705928.1 | PTS sugar transporter subunit IIB | - |
| QDY55_RS25455 (5077100) | 5077100..5078356 | + | 1257 | WP_000345347.1 | PTS ascorbate transporter subunit IIC | - |
| QDY55_RS25460 (5078656) | 5078656..5078856 | - | 201 | Protein_4992 | transposase | - |
| QDY55_RS25465 (5079278) | 5079278..5080291 | - | 1014 | WP_000107477.1 | aldose 1-epimerase family protein | - |
| QDY55_RS25470 (5080303) | 5080303..5081619 | - | 1317 | WP_000998349.1 | L-fucose:H+ symporter permease | - |
| QDY55_RS25475 (5081647) | 5081647..5082540 | - | 894 | WP_001703657.1 | ribokinase | - |
| QDY55_RS25485 (5083326) | 5083326..5084027 | + | 702 | Protein_4997 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QDY55_RS25490 (5084393) | 5084393..5085727 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QDY55_RS25495 (5085807) | 5085807..5087954 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QDY55_RS25500 (5088013) | 5088013..5089470 | + | 1458 | WP_000856827.1 | dipeptide/tripeptide permease DtpC | - |
| QDY55_RS25505 (5089707) | 5089707..5091224 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QDY55_RS25510 (5091343) | 5091343..5091516 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QDY55_RS25515 (5091544) | 5091544..5091840 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QDY55_RS25520 (5092067) | 5092067..5092339 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QDY55_RS25525 (5092351) | 5092351..5092581 | - | 231 | WP_000373291.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QDY55_RS25530 (5092762) | 5092762..5094393 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| QDY55_RS25535 (5094390) | 5094390..5095109 | + | 720 | WP_000611296.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|