MGE detailed information
MGE type: Conjugative plasmid MGE length: 84442 bp
Accession: NZ_CP122728 Location: 1..84442 Organism: Escherichia coli strain ETEC1746 Replicon: plasmid unnamed1
Accession: NZ_CP122728 Location: 1..84442 Organism: Escherichia coli strain ETEC1746 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW99_RS23590 (1) | 1..1959 | + | 1959 | WP_032084152.1 | ParB/RepB/Spo0J family partition protein | - |
| QDW99_RS23595 (2028) | 2028..2462 | + | 435 | WP_032084151.1 | conjugation system SOS inhibitor PsiB | - |
| QDW99_RS23600 (2459) | 2459..3245 | + | 787 | Protein_2 | plasmid SOS inhibition protein A | - |
| - (3190) | 3190..3407 | + | 218 | NuclAT_0 | - | - |
| - (3190) | 3190..3407 | + | 218 | NuclAT_0 | - | - |
| - (3190) | 3190..3407 | + | 218 | NuclAT_0 | - | - |
| - (3190) | 3190..3407 | + | 218 | NuclAT_0 | - | - |
| - (3190) | 3190..3407 | - | 218 | NuclAT_0 | - | - |
| QDW99_RS23605 (3395) | 3395..3547 | + | 153 | Protein_3 | DUF5431 family protein | - |
| QDW99_RS23610 (3492) | 3492..3614 | + | 123 | WP_223163518.1 | Hok/Gef family protein | - |
| QDW99_RS23615 (3915) | 3915..4211 | - | 297 | Protein_5 | hypothetical protein | - |
| QDW99_RS23620 (4435) | 4435..4731 | + | 297 | WP_001272240.1 | hypothetical protein | - |
| QDW99_RS23625 (4837) | 4837..5658 | + | 822 | WP_282868743.1 | DUF932 domain-containing protein | - |
| QDW99_RS23630 (5955) | 5955..6602 | - | 648 | WP_000601040.1 | hypothetical protein | VF |
| QDW99_RS23635 (6878) | 6878..7261 | + | 384 | WP_001151530.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDW99_RS23640 (7453) | 7453..8100 | + | 648 | WP_000338012.1 | transcriptional regulator TraJ family protein | - |
| QDW99_RS23645 (8220) | 8220..8447 | + | 228 | WP_000589558.1 | conjugal transfer relaxosome protein TraY | - |
| QDW99_RS23650 (8481) | 8481..8843 | + | 363 | WP_033566647.1 | type IV conjugative transfer system pilin TraA | - |
| QDW99_RS23655 (8848) | 8848..9159 | + | 312 | WP_001585108.1 | type IV conjugative transfer system protein TraL | - |
| QDW99_RS23660 (9181) | 9181..9747 | + | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| QDW99_RS23665 (9734) | 9734..10462 | + | 729 | WP_001230783.1 | type-F conjugative transfer system secretin TraK | - |
| QDW99_RS23670 (10462) | 10462..11889 | + | 1428 | WP_000146635.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDW99_RS23675 (11879) | 11879..12466 | + | 588 | WP_000002771.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QDW99_RS23680 (12453) | 12453..12773 | + | 321 | WP_001057280.1 | conjugal transfer protein TrbD | - |
| QDW99_RS23685 (12770) | 12770..13285 | + | 516 | WP_000724020.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDW99_RS23690 (13420) | 13420..13641 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| QDW99_RS23695 (13801) | 13801..16427 | + | 2627 | Protein_21 | type IV secretion system protein TraC | - |
| QDW99_RS23700 (16424) | 16424..16810 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| QDW99_RS23705 (16807) | 16807..17439 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| QDW99_RS23710 (17436) | 17436..18428 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| QDW99_RS23715 (18458) | 18458..18763 | + | 306 | WP_029397934.1 | hypothetical protein | - |
| QDW99_RS23720 (18772) | 18772..19410 | + | 639 | WP_032083946.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDW99_RS23725 (19407) | 19407..19787 | + | 381 | WP_000174466.1 | hypothetical protein | - |
| QDW99_RS23730 (20023) | 20023..21885 | + | 1863 | WP_282868745.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDW99_RS23735 (21912) | 21912..22169 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| QDW99_RS23740 (22162) | 22162..22905 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDW99_RS23745 (22921) | 22921..23268 | + | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| QDW99_RS23750 (23387) | 23387..23671 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDW99_RS23755 (23658) | 23658..24203 | + | 546 | WP_000059818.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDW99_RS23760 (24193) | 24193..24507 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| QDW99_RS23765 (24461) | 24461..24853 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| QDW99_RS23770 (24840) | 24840..26213 | + | 1374 | WP_000944325.1 | conjugal transfer pilus assembly protein TraH | - |
| QDW99_RS23775 (26210) | 26210..29032 | + | 2823 | WP_112033757.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDW99_RS23780 (29048) | 29048..29533 | + | 486 | WP_000605868.1 | hypothetical protein | - |
| QDW99_RS23785 (29582) | 29582..30313 | + | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| QDW99_RS23790 (30516) | 30516..31256 | + | 741 | WP_282868746.1 | hypothetical protein | - |
| QDW99_RS23795 (31307) | 31307..33523 | + | 2217 | WP_063079489.1 | type IV conjugative transfer system coupling protein TraD | - |
| QDW99_RS23800 (33523) | 33523..38793 | + | 5271 | WP_282868747.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDW99_RS23805 (38813) | 38813..39559 | + | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| QDW99_RS23810 (39618) | 39618..40478 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| QDW99_RS23815 (40581) | 40581..41141 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| QDW99_RS23820 (41274) | 41274..41432 | + | 159 | WP_021545194.1 | hypothetical protein | - |
| QDW99_RS23825 (41731) | 41731..42192 | + | 462 | WP_021545193.1 | thermonuclease family protein | - |
| QDW99_RS23830 (42238) | 42238..42447 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| QDW99_RS23835 (42485) | 42485..43075 | + | 591 | WP_032082916.1 | DUF2726 domain-containing protein | - |
| QDW99_RS23840 (43315) | 43315..43572 | + | 258 | WP_032082917.1 | replication regulatory protein RepA | - |
| QDW99_RS23845 (43806) | 43806..43880 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| QDW99_RS23850 (43873) | 43873..44730 | + | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| QDW99_RS23855 (45652) | 45652..46479 | - | 828 | WP_050511319.1 | hypothetical protein | - |
| QDW99_RS23860 (46806) | 46806..47993 | - | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| QDW99_RS23865 (47993) | 47993..48358 | - | 366 | WP_000124135.1 | hypothetical protein | - |
| QDW99_RS23870 (48635) | 48635..49822 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW99_RS23875 (49822) | 49822..50187 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW99_RS23880 (50206) | 50206..50427 | + | 222 | WP_000175571.1 | hypothetical protein | - |
| QDW99_RS23885 (50603) | 50603..50872 | + | 270 | WP_000079937.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDW99_RS23890 (50872) | 50872..51150 | + | 279 | WP_244461648.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDW99_RS23895 (51414) | 51414..52601 | + | 1188 | WP_000905831.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| QDW99_RS23900 (52690) | 52690..52995 | + | 306 | WP_000482654.1 | hypothetical protein | VF |
| QDW99_RS23910 (54285) | 54285..58375 | + | 4091 | Protein_64 | hypothetical protein | VF |
| QDW99_RS23915 (58445) | 58445..59284 | - | 840 | Protein_65 | IS66 family transposase ISEc23 | Transposase |
| QDW99_RS23920 (59366) | 59366..59791 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDW99_RS23925 (59788) | 59788..60138 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QDW99_RS23930 (60169) | 60169..61782 | + | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| QDW99_RS23935 (61814) | 61814..62167 | + | 354 | Protein_69 | protein YagA | - |
| QDW99_RS23940 (62446) | 62446..64326 | + | 1881 | WP_001619592.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QDW99_RS23945 (64348) | 64348..64683 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| QDW99_RS23950 (64812) | 64812..65159 | + | 348 | WP_001582578.1 | DUF6404 family protein | - |
| QDW99_RS23955 (65179) | 65179..65769 | - | 591 | WP_000194572.1 | hypothetical protein | - |
| QDW99_RS23960 (65769) | 65769..66023 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| QDW99_RS23965 (66592) | 66592..67005 | + | 414 | WP_032082921.1 | hypothetical protein | - |
| QDW99_RS23970 (67007) | 67007..67786 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| QDW99_RS23975 (67966) | 67966..68610 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QDW99_RS23980 (68697) | 68697..69005 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QDW99_RS23985 (69419) | 69419..70398 | + | 980 | Protein_79 | plasmid segregation protein ParM | - |
| QDW99_RS23990 (70391) | 70391..70807 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QDW99_RS23995 (70809) | 70809..72083 | - | 1275 | WP_021293549.1 | Y-family DNA polymerase | - |
| QDW99_RS24000 (72083) | 72083..72520 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QDW99_RS24005 (72517) | 72517..72765 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QDW99_RS24010 (73183) | 73183..74085 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| QDW99_RS24015 (74082) | 74082..74393 | + | 312 | WP_032083746.1 | hypothetical protein | - |
| QDW99_RS24020 (74469) | 74469..75152 | + | 684 | WP_000086147.1 | DNA methylase | - |
| QDW99_RS24025 (75153) | 75153..75374 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| QDW99_RS24030 (75388) | 75388..75822 | + | 435 | WP_032083745.1 | DUF1380 family protein | - |
| QDW99_RS24035 (75868) | 75868..76644 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| QDW99_RS24040 (77058) | 77058..77483 | + | 426 | WP_033566607.1 | antirestriction protein | - |
| QDW99_RS24045 (77530) | 77530..77952 | + | 423 | WP_001613000.1 | DUF1380 family protein | - |
| QDW99_RS24050 (77949) | 77949..78140 | + | 192 | WP_282868733.1 | hypothetical protein | - |
| QDW99_RS24055 (79114) | 79114..79344 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QDW99_RS24060 (79396) | 79396..80757 | + | 1362 | WP_130090271.1 | DUF3560 domain-containing protein | - |
| QDW99_RS24065 (80805) | 80805..81368 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| QDW99_RS24070 (81454) | 81454..81881 | - | 428 | Protein_96 | hypothetical protein | - |
| QDW99_RS24075 (82281) | 82281..83309 | - | 1029 | WP_169015401.1 | IS110 family transposase IS1663 | Transposase |
| QDW99_RS24080 (83561) | 83561..84088 | + | 528 | WP_033566688.1 | single-stranded DNA-binding protein | - |
| QDW99_RS24085 (84146) | 84146..84379 | + | 234 | WP_021558930.1 | DUF905 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|