MGE detailed information
MGE type: Prophage MGE length: 53615 bp
Accession: NZ_CP122712 Location: 4129942..4183556 Organism: Escherichia coli strain ETEC1749 Replicon: chromosome
Accession: NZ_CP122712 Location: 4129942..4183556 Organism: Escherichia coli strain ETEC1749 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX02_RS20865 (4125776) | 4125776..4127974 | + | 2199 | WP_000667036.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| QDX02_RS20870 (4127984) | 4127984..4128940 | + | 957 | WP_000121346.1 | molybdenum cofactor insertion chaperone PaoD | - |
| QDX02_RS20875 (4128991) | 4128991..4129329 | + | 339 | Protein_4092 | LysR substrate-binding domain-containing protein | - |
| QDX02_RS20880 (4129942) | 4129942..4132752 | + | 2811 | WP_000609167.1 | SIR2 family protein | - |
| QDX02_RS20885 (4132973) | 4132973..4133527 | - | 555 | WP_000905041.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QDX02_RS20890 (4133557) | 4133557..4133823 | + | 267 | Protein_4095 | tail fiber protein | - |
| QDX02_RS20895 (4134124) | 4134124..4134574 | + | 451 | Protein_4096 | tail fiber assembly protein | - |
| QDX02_RS20900 (4134546) | 4134546..4135148 | - | 603 | WP_000368085.1 | tail fiber assembly protein | - |
| QDX02_RS20905 (4135148) | 4135148..4135918 | - | 771 | WP_113918772.1 | tail fiber protein | - |
| QDX02_RS20910 (4135922) | 4135922..4136506 | - | 585 | WP_000383567.1 | YmfQ family protein | - |
| QDX02_RS20915 (4136497) | 4136497..4137554 | - | 1058 | Protein_4100 | baseplate J/gp47 family protein | - |
| QDX02_RS20920 (4137541) | 4137541..4137966 | - | 426 | WP_000424728.1 | phage GP46 family protein | - |
| QDX02_RS20925 (4137966) | 4137966..4138514 | - | 549 | WP_000643723.1 | phage baseplate assembly protein V | - |
| QDX02_RS20930 (4138514) | 4138514..4139593 | - | 1080 | WP_000999520.1 | baseplate protein | - |
| QDX02_RS20935 (4139590) | 4139590..4140918 | - | 1329 | WP_000219904.1 | DNA circularization N-terminal domain-containing protein | - |
| QDX02_RS20940 (4141074) | 4141074..4141475 | + | 402 | WP_000583556.1 | hypothetical protein | - |
| QDX02_RS20945 (4141508) | 4141508..4143340 | - | 1833 | WP_000807192.1 | phage tail tape measure protein | - |
| QDX02_RS20950 (4143482) | 4143482..4143751 | - | 270 | WP_000661047.1 | phage tail assembly protein | - |
| QDX02_RS20955 (4143751) | 4143751..4144107 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| QDX02_RS20960 (4144107) | 4144107..4145603 | - | 1497 | WP_000155701.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| QDX02_RS20965 (4145587) | 4145587..4145757 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| QDX02_RS20970 (4145766) | 4145766..4146326 | - | 561 | WP_000779292.1 | hypothetical protein | - |
| QDX02_RS20975 (4146323) | 4146323..4146829 | - | 507 | WP_000224834.1 | hypothetical protein | - |
| QDX02_RS20980 (4146804) | 4146804..4147214 | - | 411 | WP_000702389.1 | phage head closure protein | - |
| QDX02_RS20985 (4147211) | 4147211..4147534 | - | 324 | WP_000927715.1 | head-tail connector protein | - |
| QDX02_RS20990 (4147537) | 4147537..4147737 | - | 201 | WP_000601363.1 | hypothetical protein | - |
| QDX02_RS20995 (4147787) | 4147787..4148992 | - | 1206 | WP_000257507.1 | phage major capsid protein | - |
| QDX02_RS21000 (4149007) | 4149007..4149657 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| QDX02_RS21005 (4149635) | 4149635..4150876 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| QDX02_RS21010 (4150876) | 4150876..4151058 | - | 183 | WP_000605605.1 | protein YmfR | - |
| QDX02_RS21015 (4151070) | 4151070..4152803 | - | 1734 | WP_000088179.1 | terminase large subunit | - |
| QDX02_RS21020 (4152800) | 4152800..4153294 | - | 495 | WP_000929175.1 | phage terminase small subunit P27 family | - |
| QDX02_RS21025 (4153420) | 4153420..4153770 | - | 351 | WP_001135197.1 | HNH endonuclease | - |
| QDX02_RS21030 (4153921) | 4153921..4154256 | + | 336 | WP_001089762.1 | hypothetical protein | - |
| QDX02_RS21035 (4154357) | 4154357..4154926 | + | 570 | WP_000613840.1 | hypothetical protein | - |
| QDX02_RS21040 (4154948) | 4154948..4155205 | - | 258 | WP_071533016.1 | peptidase | - |
| QDX02_RS21045 (4155102) | 4155102..4155482 | - | 381 | WP_001434542.1 | DUF2570 domain-containing protein | - |
| QDX02_RS21050 (4155466) | 4155466..4155942 | - | 477 | WP_001157005.1 | glycoside hydrolase family protein | - |
| QDX02_RS21055 (4155946) | 4155946..4156272 | - | 327 | WP_001120497.1 | phage holin, lambda family | - |
| QDX02_RS21060 (4156574) | 4156574..4156975 | + | 402 | WP_001258750.1 | TIR domain-containing protein | - |
| QDX02_RS21065 (4156986) | 4156986..4157951 | + | 966 | WP_000709408.1 | caspase family protein | - |
| QDX02_RS21070 (4157982) | 4157982..4158335 | - | 354 | WP_001205452.1 | antiterminator Q family protein | - |
| QDX02_RS21075 (4158353) | 4158353..4159342 | - | 990 | WP_015675130.1 | DUF968 domain-containing protein | - |
| QDX02_RS21080 (4159350) | 4159350..4160147 | - | 798 | WP_001061416.1 | KilA-N domain-containing protein | - |
| QDX02_RS21085 (4160167) | 4160167..4160556 | - | 390 | WP_000767096.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QDX02_RS21090 (4160553) | 4160553..4160879 | - | 327 | WP_000210164.1 | LexA family transcriptional regulator | - |
| QDX02_RS21095 (4160879) | 4160879..4161373 | - | 495 | WP_074151952.1 | PerC family transcriptional regulator | - |
| QDX02_RS21100 (4161370) | 4161370..4162311 | - | 942 | WP_000104963.1 | helix-turn-helix domain-containing protein | - |
| QDX02_RS21105 (4162301) | 4162301..4162480 | - | 180 | WP_001250267.1 | DUF4222 domain-containing protein | - |
| QDX02_RS21110 (4162656) | 4162656..4163207 | - | 552 | WP_000515835.1 | protein YmfL | - |
| QDX02_RS21115 (4163251) | 4163251..4163451 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| QDX02_RS21120 (4163542) | 4163542..4164216 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| QDX02_RS21125 (4164558) | 4164558..4165052 | - | 495 | WP_000196298.1 | hypothetical protein | - |
| QDX02_RS21130 (4165293) | 4165293..4165612 | + | 320 | Protein_4143 | hypothetical protein | - |
| QDX02_RS21135 (4165694) | 4165694..4166230 | + | 537 | WP_000008241.1 | 5'-deoxynucleotidase | - |
| QDX02_RS21140 (4166221) | 4166221..4166583 | + | 363 | WP_001242749.1 | phage protein | - |
| QDX02_RS21145 (4166583) | 4166583..4166888 | + | 306 | WP_000206732.1 | protein YfdT | - |
| QDX02_RS21150 (4166888) | 4166888..4167238 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| QDX02_RS21155 (4167160) | 4167160..4168278 | + | 1119 | WP_001132557.1 | hypothetical protein ; Integrase | Integrase |
| QDX02_RS21165 (4168483) | 4168483..4169736 | - | 1254 | WP_000893279.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QDX02_RS21170 (4169748) | 4169748..4170851 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QDX02_RS21175 (4171139) | 4171139..4172194 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| QDX02_RS21180 (4172233) | 4172233..4172634 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (4173352) | 4173352..4173432 | - | 81 | NuclAT_8 | - | - |
| - (4173352) | 4173352..4173432 | - | 81 | NuclAT_8 | - | - |
| - (4173352) | 4173352..4173432 | - | 81 | NuclAT_8 | - | - |
| - (4173352) | 4173352..4173432 | - | 81 | NuclAT_8 | - | - |
| QDX02_RS21185 (4172692) | 4172692..4173936 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| QDX02_RS21190 (4174028) | 4174028..4174486 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| QDX02_RS21195 (4174747) | 4174747..4176204 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| QDX02_RS21200 (4176261) | 4176261..4176782 | - | 522 | Protein_4156 | peptide chain release factor H | - |
| QDX02_RS21205 (4176781) | 4176781..4176984 | - | 204 | Protein_4157 | RtcB family protein | - |
| QDX02_RS21210 (4177230) | 4177230..4177682 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| QDX02_RS21215 (4177692) | 4177692..4178090 | - | 399 | WP_001263490.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QDX02_RS21220 (4178093) | 4178093..4178386 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QDX02_RS21225 (4178438) | 4178438..4179493 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| QDX02_RS21230 (4179564) | 4179564..4180349 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| QDX02_RS21235 (4180321) | 4180321..4182033 | + | 1713 | Protein_4163 | hypothetical protein | VF |
| QDX02_RS21240 (4182257) | 4182257..4182754 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| QDX02_RS21245 (4182930) | 4182930..4183703 | - | 774 | WP_015675129.1 | hypothetical protein | VF |
| QDX02_RS21250 (4183889) | 4183889..4184149 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| QDX02_RS21255 (4184152) | 4184152..4184430 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| QDX02_RS21260 (4184586) | 4184586..4185326 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QDX02_RS21265 (4185297) | 4185297..4186064 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| QDX02_RS21270 (4186270) | 4186270..4186848 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|