MGE detailed information
MGE type: Conjugative plasmid MGE length: 93031 bp
Accession: NZ_CP122687 Location: 1..93031 Organism: Escherichia coli strain ETEC4067 Replicon: plasmid unnamed2
Accession: NZ_CP122687 Location: 1..93031 Organism: Escherichia coli strain ETEC4067 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX30_RS25495 (1) | 1..153 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| QDX30_RS25500 (225) | 225..476 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| QDX30_RS25505 (975) | 975..1070 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QDX30_RS25510 (1135) | 1135..1311 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| QDX30_RS25515 (1703) | 1703..1906 | + | 204 | WP_282843148.1 | HEAT repeat domain-containing protein | - |
| QDX30_RS25520 (1978) | 1978..2628 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDX30_RS25525 (2702) | 2702..4870 | - | 2169 | WP_282843149.1 | DotA/TraY family protein | - |
| QDX30_RS25530 (4967) | 4967..5551 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QDX30_RS25535 (5580) | 5580..6782 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| QDX30_RS25540 (6749) | 6749..7363 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QDX30_RS25545 (7363) | 7363..10407 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| QDX30_RS25550 (10497) | 10497..11297 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QDX30_RS25555 (11281) | 11281..11469 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QDX30_RS25560 (11533) | 11533..11937 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| QDX30_RS25565 (11988) | 11988..12515 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QDX30_RS25570 (12515) | 12515..13219 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| QDX30_RS25575 (13219) | 13219..14508 | - | 1290 | WP_001272000.1 | conjugal transfer protein TraO | - |
| QDX30_RS25580 (14511) | 14511..15494 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| QDX30_RS25585 (15505) | 15505..16197 | - | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| QDX30_RS25590 (16194) | 16194..16541 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDX30_RS25595 (16559) | 16559..20326 | - | 3768 | WP_001141542.1 | DUF5710 domain-containing protein | - |
| QDX30_RS25600 (20416) | 20416..20967 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| QDX30_RS25605 (20982) | 20982..21272 | - | 291 | WP_001372180.1 | hypothetical protein | - |
| QDX30_RS25610 (21269) | 21269..22417 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QDX30_RS25615 (22414) | 22414..23232 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| QDX30_RS25620 (23229) | 23229..23687 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDX30_RS25625 (24082) | 24082..24666 | - | 585 | WP_282843150.1 | histidine phosphatase family protein | - |
| QDX30_RS25630 (24726) | 24726..25928 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QDX30_RS25635 (26014) | 26014..26838 | - | 825 | WP_001545755.1 | conjugal transfer protein TraE | - |
| QDX30_RS25640 (26989) | 26989..28143 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| QDX30_RS25645 (29689) | 29689..29913 | + | 225 | WP_282843151.1 | hypothetical protein | - |
| QDX30_RS25650 (29910) | 29910..31202 | - | 1293 | WP_001619585.1 | hypothetical protein | VF |
| QDX30_RS25655 (31202) | 31202..31858 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| QDX30_RS25660 (31843) | 31843..32403 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| QDX30_RS25665 (32413) | 32413..33027 | - | 615 | WP_000908226.1 | hypothetical protein | VF |
| QDX30_RS25670 (33044) | 33044..34129 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QDX30_RS25675 (34142) | 34142..35695 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QDX30_RS25680 (35706) | 35706..36158 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| QDX30_RS25685 (36145) | 36145..37440 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| QDX30_RS25690 (37433) | 37433..39115 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| QDX30_RS25695 (39129) | 39129..39566 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| QDX30_RS25700 (39566) | 39566..40633 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| QDX30_RS25705 (41552) | 41552..41848 | - | 297 | WP_000494780.1 | hypothetical protein | - |
| QDX30_RS25710 (42015) | 42015..42269 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QDX30_RS25715 (42431) | 42431..42982 | - | 552 | WP_000744646.1 | hypothetical protein | - |
| QDX30_RS25720 (43155) | 43155..43838 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QDX30_RS25725 (44091) | 44091..44624 | - | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| QDX30_RS25730 (45066) | 45066..45353 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QDX30_RS25735 (45271) | 45271..45501 | - | 231 | WP_228772074.1 | ash family protein | - |
| QDX30_RS25740 (46507) | 46507..47538 | + | 1032 | WP_000907861.1 | plasmid replication initiator RepA | - |
| QDX30_RS25745 (48446) | 48446..48730 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QDX30_RS25750 (48730) | 48730..49005 | + | 276 | WP_001582571.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDX30_RS25755 (49111) | 49111..49314 | + | 204 | Protein_52 | hypothetical protein | - |
| QDX30_RS25760 (49584) | 49584..49850 | - | 267 | WP_000627829.1 | hypothetical protein | - |
| QDX30_RS25765 (49850) | 49850..50344 | - | 495 | WP_001582574.1 | hypothetical protein | - |
| QDX30_RS25770 (50400) | 50400..51002 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| QDX30_RS25775 (51356) | 51356..52771 | + | 1416 | WP_029397060.1 | protein YagA | - |
| QDX30_RS25780 (52695) | 52695..55700 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QDX30_RS25785 (55864) | 55864..56421 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDX30_RS25790 (56604) | 56604..57464 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QDX30_RS25795 (57936) | 57936..59816 | + | 1881 | WP_001619592.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QDX30_RS25800 (59838) | 59838..60173 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| QDX30_RS25805 (60302) | 60302..60649 | + | 348 | WP_001582578.1 | DUF6404 family protein | - |
| QDX30_RS25810 (60669) | 60669..61259 | - | 591 | WP_000194572.1 | hypothetical protein | - |
| QDX30_RS25815 (61259) | 61259..61513 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| QDX30_RS25820 (62082) | 62082..62494 | + | 413 | Protein_65 | hypothetical protein | - |
| QDX30_RS25825 (62496) | 62496..63275 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| QDX30_RS25830 (63455) | 63455..64099 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QDX30_RS25835 (64186) | 64186..64494 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QDX30_RS25840 (64907) | 64907..65887 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| QDX30_RS25845 (65880) | 65880..66296 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QDX30_RS25850 (66298) | 66298..67572 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| QDX30_RS25855 (67572) | 67572..68009 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QDX30_RS25860 (68006) | 68006..68254 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QDX30_RS25865 (68672) | 68672..69574 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| QDX30_RS25870 (69571) | 69571..69882 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| QDX30_RS25875 (69958) | 69958..70641 | + | 684 | WP_000086147.1 | DNA methylase | - |
| QDX30_RS25880 (70642) | 70642..70863 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| QDX30_RS25885 (70877) | 70877..71311 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| QDX30_RS25890 (71357) | 71357..72133 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| QDX30_RS25895 (72546) | 72546..72971 | + | 426 | WP_001619600.1 | antirestriction protein | - |
| QDX30_RS25900 (73018) | 73018..73440 | + | 423 | WP_001619601.1 | DUF1380 family protein | - |
| QDX30_RS25905 (73437) | 73437..73628 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| QDX30_RS25910 (73699) | 73699..74013 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| QDX30_RS25915 (74397) | 74397..74924 | + | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| QDX30_RS25920 (74982) | 74982..75215 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| QDX30_RS25925 (75274) | 75274..77232 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| QDX30_RS25930 (77287) | 77287..77721 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| QDX30_RS25935 (77718) | 77718..78437 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| QDX30_RS25940 (78434) | 78434..79030 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| QDX30_RS25945 (79492) | 79492..79992 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| QDX30_RS25950 (80721) | 80721..81155 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QDX30_RS25955 (81249) | 81249..81515 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QDX30_RS25960 (81580) | 81580..82494 | + | 915 | WP_000038401.1 | Recombination-promoting nuclease RpnA | VF |
| QDX30_RS25965 (82557) | 82557..82715 | + | 159 | WP_000150310.1 | hypothetical protein | - |
| QDX30_RS25970 (82746) | 82746..82997 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QDX30_RS25975 (83577) | 83577..84425 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| QDX30_RS25980 (84511) | 84511..84846 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QDX30_RS25985 (85080) | 85080..85412 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QDX30_RS25990 (85423) | 85423..88122 | + | 2700 | WP_001405892.1 | Protein TraI | Relaxase |
| QDX30_RS25995 (88159) | 88159..90450 | - | 2292 | WP_001289282.1 | F-type conjugative transfer protein TrbC | - |
| QDX30_RS26000 (90443) | 90443..91513 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| QDX30_RS26005 (91532) | 91532..92740 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (92920) | 92920..92977 | - | 58 | NuclAT_0 | - | - |
| - (92920) | 92920..92977 | - | 58 | NuclAT_0 | - | - |
| - (92920) | 92920..92977 | - | 58 | NuclAT_0 | - | - |
| - (92920) | 92920..92977 | - | 58 | NuclAT_0 | - | - |
| - (92920) | 92920..92977 | - | 58 | NuclAT_0 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|