MGE detailed information
MGE type: Prophage MGE length: 47204 bp
Accession: NZ_CP122685 Location: 4317272..4364475 Organism: Escherichia coli strain ETEC4067 Replicon: chromosome
Accession: NZ_CP122685 Location: 4317272..4364475 Organism: Escherichia coli strain ETEC4067 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX30_RS21180 (4313180) | 4313180..4313341 | - | 162 | WP_000490275.1 | DUF1328 domain-containing protein | - |
| QDX30_RS21185 (4313468) | 4313468..4314073 | - | 606 | WP_054579753.1 | molecular chaperone OsmY | - |
| QDX30_RS21190 (4314466) | 4314466..4316052 | - | 1587 | WP_000202566.1 | peptide chain release factor 3 | - |
| QDX30_RS21195 (4316272) | 4316272..4316520 | + | 249 | WP_001217550.1 | DinI-like family protein | - |
| QDX30_RS21200 (4316743) | 4316743..4317294 | + | 552 | WP_000543833.1 | SLATT domain-containing protein | - |
| QDX30_RS21205 (4317272) | 4317272..4318642 | + | 1371 | WP_000127306.1 | reverse transcriptase domain-containing protein | - |
| QDX30_RS21210 (4318750) | 4318750..4319037 | - | 288 | WP_001395372.1 | hypothetical protein | - |
| QDX30_RS21215 (4319080) | 4319080..4320120 | - | 1041 | WP_063086509.1 | tail fiber domain-containing protein | - |
| QDX30_RS21220 (4320133) | 4320133..4320402 | - | 270 | WP_001204892.1 | hypothetical protein | - |
| QDX30_RS21225 (4320402) | 4320402..4321691 | - | 1290 | WP_136770465.1 | phage tail protein | - |
| QDX30_RS21230 (4321750) | 4321750..4321887 | - | 138 | Protein_4158 | prophage tail fiber N-terminal domain-containing protein | - |
| QDX30_RS21235 (4321952) | 4321952..4322551 | - | 600 | WP_001233090.1 | hypothetical protein | VF |
| QDX30_RS21240 (4322622) | 4322622..4324400 | - | 1779 | WP_187643824.1 | DUF1983 domain-containing protein | - |
| QDX30_RS21245 (4324402) | 4324402..4324509 | - | 108 | Protein_4161 | hypothetical protein | - |
| QDX30_RS21250 (4324509) | 4324509..4325003 | - | 495 | WP_000373425.1 | DUF1441 family protein | - |
| QDX30_RS21255 (4325436) | 4325436..4326011 | + | 576 | WP_001189672.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| QDX30_RS21260 (4326083) | 4326083..4326460 | - | 378 | WP_063085036.1 | M15 family metallopeptidase | - |
| QDX30_RS21265 (4326463) | 4326463..4326738 | - | 276 | WP_063085037.1 | phage holin family protein | - |
| QDX30_RS21270 (4326728) | 4326728..4327120 | - | 393 | WP_032192285.1 | putative holin | - |
| QDX30_RS21275 (4327401) | 4327401..4327859 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| QDX30_RS21285 (4328782) | 4328782..4329633 | - | 852 | WP_236265347.1 | hypothetical protein | VF |
| QDX30_RS21290 (4329805) | 4329805..4330746 | + | 942 | WP_015987625.1 | hypothetical protein | - |
| QDX30_RS21295 (4330825) | 4330825..4331193 | + | 369 | WP_129110716.1 | hypothetical protein | - |
| QDX30_RS21300 (4331217) | 4331217..4331582 | - | 366 | WP_196042426.1 | antiterminator Q family protein | - |
| QDX30_RS21305 (4331597) | 4331597..4332586 | - | 990 | WP_063085034.1 | DUF968 domain-containing protein | - |
| QDX30_RS21310 (4332594) | 4332594..4333403 | - | 810 | WP_001061378.1 | KilA-N domain-containing protein | - |
| QDX30_RS21315 (4333423) | 4333423..4333608 | - | 186 | Protein_4174 | RusA family crossover junction endodeoxyribonuclease | - |
| QDX30_RS21320 (4333623) | 4333623..4334174 | - | 552 | WP_000526665.1 | protein YmfL | - |
| QDX30_RS21325 (4334167) | 4334167..4334427 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| QDX30_RS21330 (4334525) | 4334525..4335217 | + | 693 | WP_023993853.1 | XRE family transcriptional regulator | - |
| QDX30_RS21335 (4335920) | 4335920..4336282 | + | 363 | WP_000135680.1 | protein YfdP | - |
| QDX30_RS21340 (4336348) | 4336348..4337172 | + | 825 | WP_000081295.1 | YfdQ family protein | - |
| QDX30_RS21345 (4337301) | 4337301..4337837 | + | 537 | WP_063085033.1 | 5'-deoxynucleotidase | - |
| QDX30_RS21350 (4338799) | 4338799..4339818 | + | 1020 | WP_063118504.1 | DUF4365 domain-containing protein | - |
| QDX30_RS21355 (4340090) | 4340090..4341313 | - | 1224 | WP_021537116.1 | hypothetical protein ; Integrase | Integrase |
| QDX30_RS21360 (4341699) | 4341699..4342376 | - | 678 | WP_063085101.1 | pyrimidine 5'-nucleotidase | - |
| QDX30_RS21365 (4342391) | 4342391..4342837 | - | 447 | WP_001092461.1 | hypothetical protein | VF |
| QDX30_RS21370 (4342806) | 4342806..4343219 | - | 414 | WP_000204018.1 | DNA polymerase III subunit psi | - |
| QDX30_RS21375 (4343322) | 4343322..4344353 | + | 1032 | WP_001272323.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| QDX30_RS21395 (4345023) | 4345023..4345259 | - | 237 | WP_001403902.1 | DUF1435 domain-containing protein | - |
| QDX30_RS21400 (4345400) | 4345400..4346188 | + | 789 | WP_000331549.1 | siderophore-iron reductase FhuF | - |
| QDX30_RS21405 (4346226) | 4346226..4346903 | - | 678 | WP_001300509.1 | hypothetical protein | VF |
| QDX30_RS21410 (4346861) | 4346861..4347586 | - | 726 | WP_000936635.1 | hypothetical protein | VF |
| QDX30_RS21415 (4348205) | 4348205..4348975 | + | 771 | WP_001340933.1 | threonine/serine exporter ThrE family protein | - |
| QDX30_RS21420 (4348966) | 4348966..4349439 | + | 474 | WP_000538188.1 | threonine/serine exporter | - |
| QDX30_RS21425 (4349546) | 4349546..4350085 | + | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| QDX30_RS21430 (4350088) | 4350088..4350825 | + | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| QDX30_RS21435 (4350874) | 4350874..4351368 | + | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| QDX30_RS21440 (4351622) | 4351622..4353913 | + | 2292 | WP_001292661.1 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| QDX30_RS21445 (4354053) | 4354053..4355075 | - | 1023 | WP_000106030.1 | L-galactonate oxidoreductase | - |
| QDX30_RS21450 (4355214) | 4355214..4356128 | + | 915 | WP_063085100.1 | GntR family transcriptional regulator | - |
| QDX30_RS21455 (4356342) | 4356342..4357703 | + | 1362 | WP_000410144.1 | MFS transporter | - |
| QDX30_RS21460 (4357752) | 4357752..4359416 | - | 1665 | WP_063085099.1 | hypothetical protein | VF |
| QDX30_RS21465 (4359793) | 4359793..4361943 | + | 2151 | WP_001295524.1 | pyruvate/proton symporter BtsT | - |
| QDX30_RS21470 (4361993) | 4361993..4362196 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| QDX30_RS21475 (4362207) | 4362207..4363163 | + | 957 | WP_001297640.1 | GTPase | - |
| QDX30_RS21480 (4363197) | 4363197..4363499 | - | 303 | WP_000063160.1 | BrnA antitoxin family protein | Antitoxin Detail |
| QDX30_RS21485 (4363486) | 4363486..4363773 | - | 288 | WP_001297643.1 | BrnT family toxin | Toxin Detail |
| QDX30_RS21490 (4363972) | 4363972..4364669 | - | 698 | Protein_4206 | IS1 family transposase | - |
| QDX30_RS21495 (4364726) | 4364726..4364821 | + | 96 | Protein_4207 | dienelactone hydrolase family protein | - |
| QDX30_RS21500 (4364967) | 4364967..4366199 | + | 1233 | WP_024186283.1 | multidrug efflux MFS transporter MdtM | - |
| QDX30_RS21505 (4366240) | 4366240..4367520 | + | 1281 | WP_001037400.1 | DUF445 domain-containing protein | - |
| QDX30_RS21510 (4367636) | 4367636..4368787 | + | 1152 | WP_001298064.1 | double-cubane-cluster-containing anaerobic reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|