MGE detailed information
MGE type: Prophage MGE length: 39895 bp
Accession: NZ_CP122679 Location: 2172926..2212820 Organism: Escherichia coli strain ETEC4069 Replicon: chromosome
Accession: NZ_CP122679 Location: 2172926..2212820 Organism: Escherichia coli strain ETEC4069 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW53_RS10615 () | 2169650..2170102 | + | 453 | WP_032141314.1 | dihydroneopterin triphosphate diphosphatase | - |
| QDW53_RS10620 () | 2170131..2170871 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| QDW53_RS10625 () | 2170906..2171427 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QDW53_RS10630 () | 2171429..2172031 | - | 603 | Protein_2076 | YebB family permuted papain-like enzyme | - |
| QDW53_RS10635 () | 2172102..2172167 | + | 66 | WP_072093883.1 | stress response small protein YobI | - |
| QDW53_RS10640 () | 2172306..2172917 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| QDW53_RS10645 () | 2172926..2173936 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QDW53_RS10650 () | 2174084..2174869 | - | 786 | WP_000571471.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| QDW53_RS10655 () | 2174866..2175621 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| QDW53_RS10660 () | 2175700..2176632 | + | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QDW53_RS10665 () | 2176648..2177970 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| QDW53_RS10670 () | 2178090..2179061 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QDW53_RS10675 () | 2179193..2180635 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| QDW53_RS10680 () | 2180763..2181632 | - | 870 | WP_032353151.1 | DNA-binding transcriptional regulator HexR | - |
| QDW53_RS10685 () | 2181970..2183445 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| QDW53_RS10690 () | 2183680..2185491 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| QDW53_RS10695 () | 2185528..2186169 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QDW53_RS10700 () | 2186224..2187402 | - | 1179 | WP_021517157.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QDW53_RS10705 () | 2187536..2187826 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QDW53_RS10710 () | 2187893..2188249 | + | 357 | WP_001295500.1 | protein YebF | - |
| QDW53_RS10715 () | 2188576..2189235 | + | 660 | WP_063086343.1 | tellurite resistance TerB family protein | - |
| QDW53_RS10720 () | 2189399..2190568 | - | 1170 | WP_000942662.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QDW53_RS10725 () | 2190625..2191050 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QDW53_RS10730 () | 2191207..2193267 | + | 2061 | WP_063086345.1 | oligopeptidase B | - |
| QDW53_RS10735 () | 2193264..2193926 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QDW53_RS10740 () | 2193950..2194606 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QDW53_RS10745 () | 2194708..2194938 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QDW53_RS10750 () | 2195077..2195451 | + | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| QDW53_RS10755 () | 2195455..2196327 | + | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| QDW53_RS10760 () | 2196340..2196681 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 2196709..2196980 | - | 272 | - | - | Antitoxin Detail |
| - | 2196839..2196942 | + | 104 | - | - | Toxin Detail |
| QDW53_RS10765 () | 2197077..2197733 | + | 657 | WP_001520704.1 | protein-serine/threonine phosphatase | - |
| QDW53_RS10770 () | 2197734..2197925 | - | 192 | WP_001296140.1 | YebW family protein | - |
| QDW53_RS10775 () | 2198030..2198266 | - | 237 | WP_001295499.1 | YebV family protein | - |
| QDW53_RS10780 () | 2198384..2199823 | - | 1440 | WP_024166480.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QDW53_RS10785 () | 2199903..2202536 | - | 2634 | WP_001306757.1 | Intermembrane transport protein YebT | VF |
| QDW53_RS10790 () | 2202505..2203788 | - | 1284 | WP_025210564.1 | membrane integrity lipid transport subunit YebS | - |
| QDW53_RS10795 () | 2203918..2204415 | + | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| QDW53_RS10800 () | 2204512..2205210 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| QDW53_RS10805 () | 2205230..2207278 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| QDW53_RS10810 () | 2207470..2208351 | + | 882 | WP_000984517.1 | protease HtpX | - |
| QDW53_RS10815 () | 2208397..2209770 | - | 1374 | WP_001354729.1 | MFS transporter | - |
| QDW53_RS10820 () | 2209947..2210738 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| QDW53_RS10825 () | 2210882..2211121 | - | 240 | WP_001211011.1 | YobH family protein | - |
| QDW53_RS10830 () | 2211280..2211423 | + | 144 | WP_063086347.1 | PhoP/PhoQ regulator MgrB | - |
| QDW53_RS10835 () | 2211498..2211785 | + | 288 | WP_001006866.1 | YebO family protein | - |
| QDW53_RS10840 () | 2212455..2212598 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| QDW53_RS10845 () | 2212611..2212820 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| QDW53_RS10850 () | 2212986..2213795 | + | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| QDW53_RS10855 () | 2213792..2214358 | - | 567 | WP_001306762.1 | manganese efflux pump MntP | - |
| QDW53_RS10860 () | 2214787..2215245 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| QDW53_RS10865 () | 2215300..2216151 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| QDW53_RS10870 () | 2216164..2216964 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|