MGE detailed information
MGE type: Conjugative plasmid MGE length: 95104 bp
Accession: NZ_CP122674 Location: 1..95104 Organism: Escherichia coli strain ETEC4071 Replicon: plasmid unnamed1
Accession: NZ_CP122674 Location: 1..95104 Organism: Escherichia coli strain ETEC4071 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW56_RS24845 (1) | 1..1209 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| QDW56_RS24850 (1228) | 1228..2298 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| QDW56_RS24855 (2291) | 2291..4582 | + | 2292 | WP_072119433.1 | F-type conjugative transfer protein TrbC | - |
| QDW56_RS24860 (4619) | 4619..7318 | - | 2700 | WP_001405892.1 | hypothetical protein | Relaxase |
| QDW56_RS24865 (7329) | 7329..7661 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QDW56_RS24870 (7895) | 7895..8230 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QDW56_RS24875 (8316) | 8316..9164 | - | 849 | WP_001077019.1 | DUF4942 domain-containing protein | - |
| QDW56_RS24880 (9745) | 9745..9996 | + | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| QDW56_RS24885 (10027) | 10027..10272 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| QDW56_RS24890 (10272) | 10272..11162 | - | 891 | WP_000038332.1 | ISNCY family transposase ISSen7 | VF |
| QDW56_RS24895 (11227) | 11227..11493 | - | 267 | WP_119014978.1 | hypothetical protein | - |
| QDW56_RS24900 (11587) | 11587..12021 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| QDW56_RS24905 (12750) | 12750..13250 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| QDW56_RS24910 (13713) | 13713..14309 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| QDW56_RS24915 (14306) | 14306..15025 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QDW56_RS24920 (15022) | 15022..15456 | - | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| QDW56_RS24925 (15511) | 15511..17469 | - | 1959 | WP_157972606.1 | ParB/RepB/Spo0J family partition protein | - |
| QDW56_RS24930 (17528) | 17528..17761 | - | 234 | WP_000005985.1 | DUF905 family protein | - |
| QDW56_RS24935 (17819) | 17819..18346 | - | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| QDW56_RS24940 (18715) | 18715..18783 | + | 69 | Protein_19 | pilus protein | - |
| QDW56_RS24945 (19513) | 19513..21180 | + | 1668 | WP_052991863.1 | group II intron reverse transcriptase/maturase | - |
| QDW56_RS24950 (21459) | 21459..21650 | - | 192 | WP_001027497.1 | hypothetical protein | - |
| QDW56_RS24955 (21647) | 21647..22069 | - | 423 | WP_000271729.1 | DUF1380 family protein | - |
| QDW56_RS24960 (22116) | 22116..22541 | - | 426 | WP_001198886.1 | antirestriction protein | - |
| QDW56_RS24965 (22959) | 22959..23729 | - | 771 | WP_001044393.1 | hypothetical protein | - |
| QDW56_RS24970 (23780) | 23780..24266 | - | 487 | Protein_25 | DUF1380 family protein | - |
| QDW56_RS24975 (24226) | 24226..24447 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| QDW56_RS24980 (24448) | 24448..25131 | - | 684 | WP_000086178.1 | DNA methylase | - |
| QDW56_RS24985 (25208) | 25208..25519 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| QDW56_RS24990 (25516) | 25516..26418 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| QDW56_RS24995 (26836) | 26836..27084 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| QDW56_RS25000 (27081) | 27081..27518 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QDW56_RS25005 (27518) | 27518..28792 | + | 1275 | WP_167778288.1 | Y-family DNA polymerase | - |
| QDW56_RS25010 (28794) | 28794..29210 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QDW56_RS25015 (29203) | 29203..30183 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| QDW56_RS25020 (30596) | 30596..30904 | - | 309 | WP_119014982.1 | molecular chaperone GroEL | - |
| QDW56_RS25025 (30991) | 30991..31635 | - | 645 | WP_001144036.1 | ParA family protein | - |
| QDW56_RS25030 (31815) | 31815..32594 | - | 780 | WP_151310090.1 | site-specific integrase | - |
| QDW56_RS25035 (32596) | 32596..33009 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| QDW56_RS25040 (33577) | 33577..33831 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| QDW56_RS25045 (33831) | 33831..34421 | + | 591 | WP_000194572.1 | hypothetical protein | - |
| QDW56_RS25050 (34441) | 34441..34788 | - | 348 | WP_001582578.1 | DUF6404 family protein | - |
| QDW56_RS25055 (34917) | 34917..35252 | + | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| QDW56_RS25060 (35274) | 35274..37154 | - | 1881 | WP_001582575.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QDW56_RS25065 (37433) | 37433..38779 | - | 1347 | WP_001132032.1 | protein YagA | - |
| QDW56_RS25070 (39133) | 39133..39735 | + | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| QDW56_RS25075 (39791) | 39791..40285 | + | 495 | WP_001582574.1 | hypothetical protein | - |
| QDW56_RS25080 (40285) | 40285..40551 | + | 267 | WP_000627829.1 | hypothetical protein | - |
| QDW56_RS25085 (40821) | 40821..41024 | - | 204 | Protein_48 | hypothetical protein | - |
| QDW56_RS25090 (41130) | 41130..41333 | - | 204 | Protein_49 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDW56_RS25095 (41482) | 41482..42342 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QDW56_RS25100 (42525) | 42525..43082 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDW56_RS25105 (43246) | 43246..46251 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QDW56_RS25110 (46286) | 46286..46360 | - | 75 | Protein_53 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDW56_RS25115 (46360) | 46360..46644 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | - |
| QDW56_RS25120 (47552) | 47552..48583 | - | 1032 | WP_000907861.1 | plasmid replication initiator RepA | - |
| QDW56_RS25125 (49541) | 49541..49819 | + | 279 | WP_219065241.1 | ash family protein | - |
| QDW56_RS25130 (49737) | 49737..50024 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QDW56_RS25135 (50466) | 50466..50999 | + | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| QDW56_RS25140 (51252) | 51252..51935 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QDW56_RS25145 (52108) | 52108..52659 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| QDW56_RS25150 (52821) | 52821..53075 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QDW56_RS25155 (53242) | 53242..53538 | + | 297 | WP_000494780.1 | hypothetical protein | - |
| QDW56_RS25160 (54162) | 54162..55228 | + | 1067 | Protein_63 | hypothetical protein | VF |
| QDW56_RS25165 (55228) | 55228..55665 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| QDW56_RS25170 (55679) | 55679..57361 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QDW56_RS25175 (57354) | 57354..58649 | + | 1296 | WP_001774172.1 | type 4b pilus protein PilO2 | - |
| QDW56_RS25180 (58636) | 58636..59088 | + | 453 | WP_001247870.1 | hypothetical protein | VF |
| QDW56_RS25185 (59099) | 59099..60652 | + | 1554 | WP_001492932.1 | hypothetical protein | VF |
| QDW56_RS25190 (60665) | 60665..61762 | + | 1098 | WP_001492931.1 | hypothetical protein | VF |
| QDW56_RS25195 (61780) | 61780..62394 | + | 615 | WP_001542527.1 | hypothetical protein | VF |
| QDW56_RS25200 (62404) | 62404..62964 | + | 561 | WP_001774171.1 | hypothetical protein | VF |
| QDW56_RS25205 (62949) | 62949..63605 | + | 657 | WP_001193554.1 | hypothetical protein | VF |
| QDW56_RS25210 (63605) | 63605..64897 | + | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QDW56_RS25215 (64894) | 64894..65097 | - | 204 | WP_282868463.1 | shufflon protein A | - |
| QDW56_RS25220 (66665) | 66665..67819 | + | 1155 | WP_001139958.1 | site-specific integrase | - |
| QDW56_RS25225 (67970) | 67970..68794 | + | 825 | WP_001238935.1 | conjugal transfer protein TraE | - |
| QDW56_RS25230 (68879) | 68879..70081 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QDW56_RS25235 (70141) | 70141..70725 | + | 585 | WP_000977523.1 | histidine phosphatase family protein | - |
| QDW56_RS25240 (71120) | 71120..71578 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDW56_RS25245 (71575) | 71575..72393 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| QDW56_RS25250 (72390) | 72390..73538 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QDW56_RS25255 (73535) | 73535..73825 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| QDW56_RS25260 (73840) | 73840..74391 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| QDW56_RS25265 (74482) | 74482..78249 | + | 3768 | WP_052983927.1 | DUF5710 domain-containing protein | - |
| QDW56_RS25270 (78267) | 78267..78614 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDW56_RS25275 (78611) | 78611..79303 | + | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| QDW56_RS25280 (79314) | 79314..80297 | + | 984 | WP_001191879.1 | hypothetical protein | VF |
| QDW56_RS25285 (80300) | 80300..81589 | + | 1290 | WP_001774189.1 | conjugal transfer protein TraO | - |
| QDW56_RS25290 (81589) | 81589..82293 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QDW56_RS25295 (82293) | 82293..82820 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QDW56_RS25300 (82871) | 82871..83275 | + | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| QDW56_RS25305 (83339) | 83339..83527 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QDW56_RS25310 (83511) | 83511..84311 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QDW56_RS25315 (84401) | 84401..87445 | + | 3045 | WP_001024786.1 | IncI1-type conjugal transfer protein TraU | - |
| QDW56_RS25320 (87445) | 87445..88059 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QDW56_RS25325 (88026) | 88026..89228 | + | 1203 | WP_001385654.1 | IncI1-type conjugal transfer protein TraW | - |
| QDW56_RS25330 (89257) | 89257..89841 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QDW56_RS25335 (89938) | 89938..92106 | + | 2169 | WP_001774191.1 | DotA/TraY family protein | - |
| QDW56_RS25340 (92180) | 92180..92830 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDW56_RS25345 (92902) | 92902..93111 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QDW56_RS25350 (93503) | 93503..93679 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| QDW56_RS25355 (93744) | 93744..93839 | - | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QDW56_RS25360 (94338) | 94338..94589 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| QDW56_RS25365 (94661) | 94661..94813 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - (94868) | 94868..94925 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (94868) | 94868..94925 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (94868) | 94868..94925 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (94868) | 94868..94925 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|