MGE detailed information
MGE type: Genomic_island MGE length: 39267 bp
Accession: NZ_CP122673 Location: 4522838..4562104 Organism: Escherichia coli strain ETEC4071 Replicon: chromosome
Accession: NZ_CP122673 Location: 4522838..4562104 Organism: Escherichia coli strain ETEC4071 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW56_RS22255 (4518159) | 4518159..4518497 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| QDW56_RS22260 (4518473) | 4518473..4520170 | + | 1698 | WP_000068919.1 | protein-disulfide reductase DsbD | - |
| QDW56_RS22265 (4520207) | 4520207..4520782 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QDW56_RS22275 (4521162) | 4521162..4522424 | + | 1263 | WP_063086402.1 | integrase arm-type DNA-binding domain-containing protein | - |
| QDW56_RS22280 (4522593) | 4522593..4522773 | + | 181 | Protein_4359 | transposase domain-containing protein | - |
| QDW56_RS22285 (4522805) | 4522805..4523197 | + | 393 | Protein_4360 | IS4 family transposase IS4 | Transposase |
| QDW56_RS22290 (4523207) | 4523207..4523521 | - | 315 | Protein_4361 | IS66 family transposase ISCro1 | Transposase |
| QDW56_RS22295 (4523576) | 4523576..4524019 | + | 444 | Protein_4362 | IS66 family transposase ISEc43 | Transposase |
| QDW56_RS22300 (4524154) | 4524154..4525482 | + | 1329 | WP_000019626.1 | nucleotidyltransferase | - |
| QDW56_RS22305 (4525490) | 4525490..4526065 | + | 576 | WP_000194394.1 | SLATT domain-containing protein | - |
| QDW56_RS22310 (4526617) | 4526617..4527342 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| QDW56_RS22315 (4527339) | 4527339..4528643 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| QDW56_RS22320 (4528640) | 4528640..4529392 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| QDW56_RS22325 (4529392) | 4529392..4531176 | - | 1785 | WP_000269401.1 | P-loop NTPase fold protein | - |
| QDW56_RS22330 (4531308) | 4531308..4532582 | - | 1275 | WP_219789537.1 | hypothetical protein | - |
| QDW56_RS22335 (4532821) | 4532821..4533078 | - | 258 | Protein_4370 | VasL domain-containing protein | - |
| QDW56_RS22340 (4533791) | 4533791..4533982 | + | 192 | WP_001287884.1 | DUF4222 domain-containing protein | - |
| QDW56_RS22345 (4534035) | 4534035..4534268 | - | 234 | WP_000124191.1 | hypothetical protein | - |
| QDW56_RS22350 (4534364) | 4534364..4534987 | - | 624 | WP_001364382.1 | hypothetical protein | - |
| QDW56_RS22355 (4535121) | 4535121..4535291 | - | 171 | WP_001216315.1 | hypothetical protein | - |
| QDW56_RS22360 (4535297) | 4535297..4535710 | - | 414 | WP_001013297.1 | putative zinc ribbon protein | - |
| QDW56_RS22365 (4535707) | 4535707..4536090 | - | 384 | WP_000270991.1 | putative zinc ribbon protein | - |
| QDW56_RS22370 (4536350) | 4536350..4536919 | - | 570 | WP_000148635.1 | inovirus Gp2 family protein | - |
| QDW56_RS22375 (4537123) | 4537123..4537320 | + | 198 | WP_074156802.1 | hypothetical protein | - |
| QDW56_RS22380 (4537659) | 4537659..4537871 | - | 213 | WP_000453333.1 | hemolysin expression modulator Hha | - |
| QDW56_RS22385 (4538574) | 4538574..4538780 | + | 207 | WP_001025263.1 | AlpA family transcriptional regulator | - |
| QDW56_RS22390 (4538866) | 4538866..4539438 | + | 573 | WP_001170556.1 | hypothetical protein | - |
| QDW56_RS22395 (4539553) | 4539553..4541058 | - | 1506 | WP_063086396.1 | YfjI family protein | - |
| QDW56_RS22400 (4542241) | 4542241..4543113 | + | 873 | WP_001069689.1 | GTPase family protein | - |
| QDW56_RS22405 (4543485) | 4543485..4546331 | + | 2847 | WP_063086393.1 | Ag43/Cah family autotransporter adhesin | - |
| QDW56_RS22410 (4546659) | 4546659..4547477 | + | 819 | WP_001234392.1 | DUF932 domain-containing protein | - |
| QDW56_RS22415 (4547569) | 4547569..4548054 | + | 486 | WP_000213706.1 | antirestriction protein | - |
| QDW56_RS22420 (4548069) | 4548069..4548545 | + | 477 | WP_001186784.1 | RadC family protein | - |
| QDW56_RS22425 (4548614) | 4548614..4548835 | + | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| QDW56_RS22430 (4548854) | 4548854..4549498 | + | 645 | WP_000086748.1 | hypothetical protein | - |
| QDW56_RS22435 (4549548) | 4549548..4549916 | + | 369 | WP_032178229.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QDW56_RS22440 (4550006) | 4550006..4550383 | + | 378 | WP_000854800.1 | TA system toxin CbtA family protein | Toxin Detail |
| QDW56_RS22445 (4550380) | 4550380..4550868 | + | 489 | WP_000779171.1 | DUF5983 family protein | - |
| QDW56_RS22450 (4550880) | 4550880..4551077 | + | 198 | WP_001374283.1 | DUF957 domain-containing protein | - |
| QDW56_RS22455 (4551162) | 4551162..4552004 | + | 843 | WP_063086391.1 | DUF4942 domain-containing protein | - |
| QDW56_RS22460 (4552753) | 4552753..4554291 | + | 1539 | WP_001187196.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QDW56_RS22465 (4554657) | 4554657..4555991 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QDW56_RS22470 (4556071) | 4556071..4558218 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QDW56_RS22475 (4558277) | 4558277..4559734 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| QDW56_RS22480 (4559971) | 4559971..4561488 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QDW56_RS22485 (4561607) | 4561607..4561780 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QDW56_RS22490 (4561808) | 4561808..4562104 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QDW56_RS22495 (4562332) | 4562332..4562604 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QDW56_RS22500 (4562616) | 4562616..4562846 | - | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QDW56_RS22505 (4563026) | 4563026..4564657 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| QDW56_RS22510 (4564654) | 4564654..4565373 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|