MGE detailed information
MGE type: Mobilizable plasmid MGE length: 58798 bp
Accession: NZ_CP122663 Location: 1..58798 Organism: Escherichia coli strain ETEC4073 Replicon: plasmid unnamed3
Accession: NZ_CP122663 Location: 1..58798 Organism: Escherichia coli strain ETEC4073 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY26_RS24570 (QDY26_24570) | 1..1317 | + | 1317 | WP_282841405.1 | hypothetical protein | VF |
| QDY26_RS24575 (QDY26_24575) | 3050..4174 | + | 1125 | WP_000486716.1 | site-specific integrase | - |
| QDY26_RS24580 (QDY26_24580) | 4186..4839 | + | 654 | WP_000572553.1 | hypothetical protein | - |
| QDY26_RS24585 (QDY26_24585) | 4869..5401 | + | 533 | Protein_3 | thermonuclease family protein | - |
| QDY26_RS24590 (QDY26_24590) | 5496..7172 | + | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| QDY26_RS24595 (QDY26_24595) | 7342..7917 | + | 576 | WP_001303470.1 | hypothetical protein | - |
| QDY26_RS24600 (QDY26_24600) | 7922..10087 | + | 2166 | WP_065749864.1 | type IA DNA topoisomerase | - |
| QDY26_RS24605 (QDY26_24605) | 10156..10362 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| QDY26_RS24610 (QDY26_24610) | 10708..11148 | + | 441 | WP_282841410.1 | hypothetical protein | - |
| QDY26_RS24615 (QDY26_24615) | 11191..15011 | - | 3821 | Protein_9 | relaxase | - |
| QDY26_RS24620 (QDY26_24620) | 15008..15349 | - | 342 | WP_000725934.1 | hypothetical protein | Relaxase |
| QDY26_RS24625 (QDY26_24625) | 15718..16026 | + | 309 | WP_105075932.1 | zinc transporter | - |
| QDY26_RS24630 (QDY26_24630) | 16136..16888 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| QDY26_RS24635 (QDY26_24635) | 16890..17597 | + | 708 | WP_021503228.1 | hypothetical protein | - |
| QDY26_RS24640 (QDY26_24640) | 17617..17748 | + | 132 | Protein_14 | hypothetical protein | - |
| QDY26_RS24645 (QDY26_24645) | 18072..18269 | + | 198 | WP_001439049.1 | hypothetical protein | - |
| QDY26_RS24650 (QDY26_24650) | 18271..18480 | + | 210 | WP_000951714.1 | hypothetical protein | - |
| QDY26_RS24655 (QDY26_24655) | 18477..18803 | + | 327 | WP_000206697.1 | hypothetical protein | - |
| QDY26_RS24660 (QDY26_24660) | 18934..19371 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| QDY26_RS24665 (QDY26_24665) | 19396..19578 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| QDY26_RS24670 (QDY26_24670) | 19875..20318 | + | 444 | WP_000192625.1 | hypothetical protein | - |
| QDY26_RS24675 (QDY26_24675) | 20735..21028 | - | 294 | WP_000673428.1 | hypothetical protein | - |
| QDY26_RS24680 (QDY26_24680) | 21599..21841 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| QDY26_RS24685 (QDY26_24685) | 21838..22092 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| QDY26_RS24690 (QDY26_24690) | 22089..22631 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| QDY26_RS24695 (QDY26_24695) | 22735..23250 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| QDY26_RS24700 (QDY26_24700) | 23654..23983 | - | 330 | WP_000855119.1 | hypothetical protein | - |
| QDY26_RS24705 (QDY26_24705) | 24571..25236 | + | 666 | WP_000532149.1 | division plane positioning ATPase MipZ | - |
| QDY26_RS24710 (QDY26_24710) | 25310..25594 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| QDY26_RS24715 (QDY26_24715) | 25612..26208 | - | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| QDY26_RS24720 (QDY26_24720) | 26358..26480 | - | 123 | WP_223685802.1 | Hok/Gef family protein | - |
| QDY26_RS24725 (QDY26_24725) | 26425..26577 | - | 153 | Protein_31 | DUF5431 family protein | - |
| QDY26_RS24730 (QDY26_24730) | 26782..27990 | + | 1209 | WP_044722415.1 | IS200-IS605 family transposase IS609 | Transposase |
| QDY26_RS24735 (QDY26_24735) | 29257..30285 | - | 1029 | WP_001175209.1 | plasmid replication initiator RepA | - |
| QDY26_RS24740 (QDY26_24740) | 31417..31869 | + | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
| QDY26_RS24745 (QDY26_24745) | 31862..32056 | + | 195 | WP_001127356.1 | DUF1187 family protein | - |
| QDY26_RS24750 (QDY26_24750) | 32102..33055 | + | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| QDY26_RS24755 (QDY26_24755) | 33429..33872 | + | 444 | WP_000964331.1 | NfeD family protein | - |
| QDY26_RS24760 (QDY26_24760) | 33876..34046 | + | 171 | WP_000550720.1 | hypothetical protein | - |
| QDY26_RS24765 (QDY26_24765) | 34057..34503 | + | 447 | WP_001243164.1 | hypothetical protein | - |
| QDY26_RS24770 (QDY26_24770) | 34536..34793 | + | 258 | WP_000285945.1 | hypothetical protein | - |
| QDY26_RS24775 (QDY26_24775) | 34774..35076 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| QDY26_RS24780 (QDY26_24780) | 35073..35330 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| QDY26_RS24785 (QDY26_24785) | 35334..36320 | + | 987 | WP_001028544.1 | type IV secretion system protein | - |
| QDY26_RS24790 (QDY26_24790) | 36326..36973 | + | 648 | WP_000653673.1 | hypothetical protein | VF |
| QDY26_RS24795 (QDY26_24795) | 36977..37213 | + | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| QDY26_RS24800 (QDY26_24800) | 37291..38049 | - | 759 | WP_224482110.1 | DUF5710 domain-containing protein | - |
| QDY26_RS24805 (QDY26_24805) | 38130..38765 | + | 636 | WP_000835765.1 | hypothetical protein | - |
| QDY26_RS24810 (QDY26_24810) | 38832..39131 | + | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QDY26_RS24815 (QDY26_24815) | 39134..40348 | + | 1215 | WP_282841393.1 | hypothetical protein | VF |
| QDY26_RS24820 (QDY26_24820) | 40354..40791 | + | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| QDY26_RS24825 (QDY26_24825) | 40910..41308 | + | 399 | WP_001153668.1 | hypothetical protein | - |
| QDY26_RS24830 (QDY26_24830) | 41329..41913 | + | 585 | WP_001177114.1 | Type IV secretion system protein virB1 | VF |
| QDY26_RS24835 (QDY26_24835) | 41913..42203 | + | 291 | WP_000865479.1 | conjugal transfer protein | - |
| QDY26_RS24840 (QDY26_24840) | 42274..42594 | + | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| QDY26_RS24845 (QDY26_24845) | 42600..44957 | + | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| QDY26_RS24850 (QDY26_24850) | 45123..45857 | + | 735 | WP_000432283.1 | Type IV secretion system protein virB8 | VF |
| QDY26_RS24855 (QDY26_24855) | 45854..46624 | + | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| QDY26_RS24860 (QDY26_24860) | 46614..47753 | + | 1140 | WP_000790641.1 | Type IV secretion system protein virB10 | VF |
| QDY26_RS24865 (QDY26_24865) | 47772..48827 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| QDY26_RS24870 (QDY26_24870) | 48843..50801 | + | 1959 | WP_086354543.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QDY26_RS24875 (QDY26_24875) | 50852..52495 | + | 1644 | WP_054173908.1 | Outer membrane lipoprotein BfpB | VF |
| QDY26_RS24880 (QDY26_24880) | 52546..53856 | + | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| QDY26_RS24885 (QDY26_24885) | 53840..54334 | + | 495 | WP_000912553.1 | hypothetical protein | VF |
| QDY26_RS24890 (QDY26_24890) | 54359..55897 | + | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| QDY26_RS24895 (QDY26_24895) | 55888..56997 | + | 1110 | WP_282841401.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QDY26_RS24900 (QDY26_24900) | 57042..57599 | + | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| QDY26_RS24905 (QDY26_24905) | 57665..58147 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| QDY26_RS24910 (QDY26_24910) | 58151..58786 | + | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|