MGE detailed information
MGE type: Prophage MGE length: 56055 bp
Accession: NZ_CP122655 Location: 2678586..2734640 Organism: Escherichia coli strain ETEC4074 Replicon: chromosome
Accession: NZ_CP122655 Location: 2678586..2734640 Organism: Escherichia coli strain ETEC4074 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW60_RS13400 (2676339) | 2676339..2677472 | + | 1134 | WP_000837924.1 | porin OmpN | - |
| QDW60_RS13405 (2677613) | 2677613..2678047 | + | 435 | WP_001295593.1 | universal stress protein UspF | - |
| QDW60_RS13410 (2678586) | 2678586..2679149 | - | 564 | WP_282953952.1 | DUF4376 domain-containing protein | - |
| QDW60_RS13415 (2679149) | 2679149..2681152 | - | 2004 | WP_033566595.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QDW60_RS13420 (2681177) | 2681177..2682265 | - | 1089 | WP_032083596.1 | phage late control protein | - |
| QDW60_RS13425 (2682256) | 2682256..2682474 | - | 219 | WP_032083597.1 | tail protein X | - |
| QDW60_RS13430 (2682449) | 2682449..2682937 | - | 489 | WP_032083598.1 | phage tail protein | - |
| QDW60_RS13435 (2682940) | 2682940..2684592 | - | 1653 | WP_032083599.1 | hypothetical protein | - |
| QDW60_RS13440 (2684710) | 2684710..2685012 | - | 303 | WP_001291421.1 | phage tail assembly protein | - |
| QDW60_RS13445 (2685072) | 2685072..2685590 | - | 519 | WP_000988219.1 | phage major tail tube protein | - |
| QDW60_RS13450 (2685587) | 2685587..2687062 | - | 1476 | WP_000015654.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| QDW60_RS13455 (2687117) | 2687117..2687662 | - | 546 | WP_032083600.1 | tail fiber assembly protein | - |
| QDW60_RS13460 (2687665) | 2687665..2688882 | - | 1218 | WP_032083601.1 | phage tail protein | - |
| QDW60_RS13465 (2688879) | 2688879..2689469 | - | 591 | WP_032083602.1 | phage tail protein I | - |
| QDW60_RS13470 (2689462) | 2689462..2690376 | - | 915 | WP_282953790.1 | baseplate J/gp47 family protein | - |
| QDW60_RS13475 (2690351) | 2690351..2690707 | - | 357 | WP_000579231.1 | GPW/gp25 family protein | - |
| QDW60_RS13480 (2690741) | 2690741..2691364 | - | 624 | WP_000049992.1 | phage baseplate assembly protein V | - |
| QDW60_RS13485 (2691348) | 2691348..2691899 | - | 552 | WP_001406275.1 | hypothetical protein | - |
| QDW60_RS13490 (2691911) | 2691911..2692633 | - | 723 | WP_032083603.1 | hypothetical protein | - |
| QDW60_RS13495 (2692614) | 2692614..2693384 | - | 771 | WP_282840444.1 | head-tail joining protein | - |
| QDW60_RS13500 (2693435) | 2693435..2694463 | - | 1029 | WP_032083605.1 | major capsid protein | - |
| QDW60_RS13505 (2694533) | 2694533..2694868 | - | 336 | WP_032083606.1 | head decoration protein | - |
| QDW60_RS13510 (2694908) | 2694908..2696524 | - | 1617 | WP_096095873.1 | S49 family peptidase | - |
| QDW60_RS13515 (2696514) | 2696514..2698037 | - | 1524 | WP_050511299.1 | phage portal protein | - |
| QDW60_RS13520 (2698082) | 2698082..2698291 | - | 210 | WP_032083609.1 | gpW family head-tail joining protein | - |
| QDW60_RS13525 (2698295) | 2698295..2700211 | - | 1917 | WP_032083610.1 | phage terminase large subunit family protein | - |
| QDW60_RS13530 (2700183) | 2700183..2700731 | - | 549 | WP_032083611.1 | terminase small subunit | - |
| QDW60_RS13540 (2702269) | 2702269..2702454 | - | 186 | WP_231242712.1 | hypothetical protein | - |
| QDW60_RS13545 (2702483) | 2702483..2702596 | - | 114 | WP_001305859.1 | hypothetical protein | - |
| QDW60_RS13550 (2702728) | 2702728..2703009 | - | 282 | WP_032084003.1 | hypothetical protein | - |
| QDW60_RS13555 (2703080) | 2703080..2703457 | - | 378 | WP_032084002.1 | M15 family metallopeptidase | - |
| QDW60_RS13560 (2703460) | 2703460..2703735 | - | 276 | WP_032084004.1 | phage holin family protein | - |
| QDW60_RS13565 (2703725) | 2703725..2704117 | - | 393 | WP_001294583.1 | putative holin | - |
| QDW60_RS13570 (2704175) | 2704175..2704600 | - | 426 | WP_000823297.1 | subtilase family AB5 toxin binding subunit | - |
| QDW60_RS13575 (2704668) | 2704668..2705393 | - | 726 | WP_001774831.1 | enterotoxin A family protein | - |
| QDW60_RS13580 (2705781) | 2705781..2706323 | - | 543 | WP_000640105.1 | DUF1133 family protein | - |
| QDW60_RS13585 (2706320) | 2706320..2706610 | - | 291 | WP_000228027.1 | DUF1364 domain-containing protein | - |
| QDW60_RS13590 (2706610) | 2706610..2707209 | - | 600 | WP_001774830.1 | DUF1367 family protein | - |
| QDW60_RS13595 (2707269) | 2707269..2707493 | - | 225 | WP_050438797.1 | hypothetical protein | - |
| QDW60_RS13600 (2707813) | 2707813..2708923 | + | 1111 | Protein_2667 | IS4-like element IS421 family transposase | - |
| QDW60_RS13605 (2709117) | 2709117..2709272 | - | 156 | WP_001774828.1 | Hok/Gef family protein | - |
| QDW60_RS13610 (2709616) | 2709616..2710707 | + | 1092 | WP_000893387.1 | hypothetical protein | - |
| QDW60_RS13615 (2710704) | 2710704..2711132 | + | 429 | WP_000748513.1 | hypothetical protein | - |
| QDW60_RS13620 (2711173) | 2711173..2711766 | + | 594 | WP_001298823.1 | hypothetical protein | - |
| QDW60_RS13625 (2711763) | 2711763..2712284 | - | 522 | WP_001774827.1 | antiterminator Q family protein | - |
| QDW60_RS13630 (2712445) | 2712445..2712867 | - | 423 | WP_032083629.1 | DUF977 family protein | - |
| QDW60_RS13635 (2712884) | 2712884..2713645 | - | 762 | WP_032083630.1 | DUF1627 domain-containing protein | - |
| QDW60_RS13640 (2713668) | 2713668..2714414 | - | 747 | WP_032083631.1 | ATP-binding protein | - |
| QDW60_RS13645 (2714421) | 2714421..2714729 | - | 309 | Protein_2676 | hypothetical protein | - |
| QDW60_RS13650 (2715111) | 2715111..2715545 | - | 435 | Protein_2677 | hypothetical protein | - |
| QDW60_RS13655 (2715623) | 2715623..2716045 | - | 423 | WP_032083632.1 | toxin YdaT family protein | - |
| QDW60_RS13660 (2716029) | 2716029..2716304 | - | 276 | WP_001774821.1 | YdaS family helix-turn-helix protein | - |
| QDW60_RS13665 (2716412) | 2716412..2716873 | + | 462 | WP_001774820.1 | helix-turn-helix domain-containing protein | - |
| QDW60_RS13670 (2717124) | 2717124..2717402 | + | 279 | WP_001406915.1 | hypothetical protein | - |
| QDW60_RS13675 (2717534) | 2717534..2717689 | + | 156 | WP_077170439.1 | DUF1391 family protein | - |
| QDW60_RS13680 (2717686) | 2717686..2718174 | - | 489 | WP_050511300.1 | superinfection exclusion B family protein | - |
| QDW60_RS13685 (2718852) | 2718852..2719085 | + | 234 | WP_000687874.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QDW60_RS13690 (2719094) | 2719094..2719414 | + | 321 | WP_032083634.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDW60_RS13695 (2719758) | 2719758..2720294 | + | 537 | Protein_2686 | Rha family transcriptional regulator | - |
| QDW60_RS13700 (2720341) | 2720341..2720562 | + | 222 | WP_000560228.1 | killing protein KilR | - |
| QDW60_RS13705 (2720556) | 2720556..2720732 | + | 177 | WP_000241145.1 | YdaE family protein | - |
| QDW60_RS13710 (2720806) | 2720806..2721081 | + | 276 | WP_000632298.1 | hypothetical protein | - |
| QDW60_RS13715 (2721183) | 2721183..2724326 | + | 3144 | WP_032083635.1 | exodeoxyribonuclease VIII | - |
| QDW60_RS13720 (2724338) | 2724338..2725390 | + | 1053 | WP_032083636.1 | RecT family recombinase | - |
| QDW60_RS13725 (2725454) | 2725454..2725648 | + | 195 | WP_032083637.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| - (2725647) | 2725647..2725825 | - | 179 | NuclAT_8 | - | Antitoxin Detail |
| - (2725647) | 2725647..2725825 | - | 179 | NuclAT_8 | - | Antitoxin Detail |
| - (2725647) | 2725647..2725825 | - | 179 | NuclAT_8 | - | Antitoxin Detail |
| - (2725647) | 2725647..2725825 | - | 179 | NuclAT_8 | - | Antitoxin Detail |
| QDW60_RS13730 (2725641) | 2725641..2725829 | + | 189 | WP_001602382.1 | DUF1187 family protein | - |
| QDW60_RS13735 (2725929) | 2725929..2726144 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| QDW60_RS13740 (2726146) | 2726146..2727381 | + | 1236 | WP_072014650.1 | site-specific integrase | - |
| QDW60_RS13745 (2727433) | 2727433..2728368 | + | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| QDW60_RS13750 (2728497) | 2728497..2729870 | - | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| QDW60_RS13755 (2729900) | 2729900..2730073 | - | 174 | WP_001296046.1 | protein YnaL | - |
| QDW60_RS13760 (2730348) | 2730348..2731331 | - | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| QDW60_RS13765 (2731345) | 2731345..2731392 | - | 48 | WP_211180494.1 | protein YnaN | - |
| QDW60_RS13770 (2731586) | 2731586..2732818 | + | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| QDW60_RS13775 (2732839) | 2732839..2733402 | - | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| QDW60_RS13780 (2733732) | 2733732..2734640 | - | 909 | WP_021559089.1 | LysR family transcriptional regulator | - |
| QDW60_RS13785 (2734816) | 2734816..2736126 | + | 1311 | WP_032083638.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| QDW60_RS13790 (2736126) | 2736126..2737403 | + | 1278 | WP_032083639.1 | M20 family metallopeptidase | - |
| QDW60_RS13795 (2737440) | 2737440..2738966 | + | 1527 | WP_001619392.1 | p-aminobenzoyl-glutamate transporter | - |
| QDW60_RS13800 (2738977) | 2738977..2739492 | + | 516 | WP_000945005.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|