MGE detailed information
MGE type: Prophage MGE length: 53525 bp
Accession: NZ_CP122655 Location: 2195185..2248709 Organism: Escherichia coli strain ETEC4074 Replicon: chromosome
Accession: NZ_CP122655 Location: 2195185..2248709 Organism: Escherichia coli strain ETEC4074 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW60_RS10780 (2191700) | 2191700..2192446 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| QDW60_RS10785 (2192535) | 2192535..2193221 | + | 687 | WP_032083675.1 | DNA-binding transcriptional regulator rspR | - |
| QDW60_RS10790 (2193398) | 2193398..2193601 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QDW60_RS10795 (2193636) | 2193636..2195096 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| QDW60_RS10800 (2195185) | 2195185..2196468 | - | 1284 | Protein_2110 | MHS family MFS transporter YdfJ | - |
| QDW60_RS10805 (2197055) | 2197055..2197752 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| QDW60_RS10810 (2197850) | 2197850..2197963 | + | 114 | WP_122985608.1 | YnaM/YnfT family protein | - |
| QDW60_RS10815 (2198032) | 2198032..2198265 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QDW60_RS10820 (2198583) | 2198583..2199173 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QDW60_RS10825 (2199271) | 2199271..2199846 | - | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| QDW60_RS10830 (2199846) | 2199846..2202869 | - | 3024 | WP_096111943.1 | phage tail protein | - |
| QDW60_RS10835 (2202934) | 2202934..2203533 | - | 600 | WP_001230340.1 | hypothetical protein | VF |
| QDW60_RS10840 (2203600) | 2203600..2206998 | - | 3399 | WP_096111942.1 | host specificity protein J | - |
| QDW60_RS10845 (2207059) | 2207059..2207706 | - | 648 | WP_023277304.1 | tail assembly protein | - |
| QDW60_RS10850 (2207604) | 2207604..2208347 | - | 744 | WP_020219026.1 | C40 family peptidase | - |
| QDW60_RS10855 (2208352) | 2208352..2209056 | - | 705 | WP_032084233.1 | phage minor tail protein L | - |
| QDW60_RS10860 (2209066) | 2209066..2209395 | - | 330 | WP_000447253.1 | phage tail protein | - |
| QDW60_RS10865 (2209395) | 2209395..2212460 | - | 3066 | WP_001365823.1 | phage tail tape measure protein | - |
| QDW60_RS10870 (2212432) | 2212432..2212761 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| QDW60_RS10875 (2212770) | 2212770..2213156 | - | 387 | WP_001297778.1 | phage minor tail protein G | - |
| QDW60_RS10880 (2213217) | 2213217..2213960 | - | 744 | WP_000211109.1 | phage tail protein | - |
| QDW60_RS10885 (2213972) | 2213972..2214373 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| QDW60_RS10890 (2214370) | 2214370..2214948 | - | 579 | WP_020219021.1 | phage tail protein | - |
| QDW60_RS10895 (2214960) | 2214960..2215235 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| QDW60_RS10900 (2215228) | 2215228..2215551 | - | 324 | WP_001097050.1 | DUF2190 family protein | - |
| QDW60_RS10905 (2215638) | 2215638..2217665 | - | 2028 | WP_001136587.1 | hypothetical protein | VF |
| QDW60_RS10910 (2217610) | 2217610..2219190 | - | 1581 | WP_011478361.1 | phage portal protein | - |
| QDW60_RS10915 (2219118) | 2219118..2219330 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| QDW60_RS10920 (2219327) | 2219327..2221426 | - | 2100 | WP_001774468.1 | phage terminase large subunit family protein | - |
| QDW60_RS10925 (2221435) | 2221435..2221962 | - | 528 | WP_001389340.1 | DUF1441 family protein | - |
| QDW60_RS10930 (2222535) | 2222535..2222741 | - | 207 | WP_001031431.1 | hypothetical protein | - |
| QDW60_RS10935 (2223042) | 2223042..2223452 | + | 411 | WP_000035574.1 | DUF1398 domain-containing protein | - |
| QDW60_RS10940 (2223604) | 2223604..2223777 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QDW60_RS10945 (2223949) | 2223949..2224179 | - | 231 | WP_000720962.1 | protein YnfN | - |
| QDW60_RS10950 (2224184) | 2224184..2224249 | - | 66 | WP_122134696.1 | small protein YnfR | - |
| QDW60_RS10955 (2224252) | 2224252..2224440 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| QDW60_RS10960 (2224451) | 2224451..2224663 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QDW60_RS10965 (2225026) | 2225026..2225523 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QDW60_RS10970 (2225520) | 2225520..2226053 | - | 534 | WP_001092971.1 | lysozyme | - |
| QDW60_RS10975 (2226050) | 2226050..2226361 | - | 312 | WP_000189915.1 | YdfR family protein | - |
| QDW60_RS10980 (2226366) | 2226366..2226581 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QDW60_RS10985 (2226801) | 2226801..2226971 | + | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| QDW60_RS10990 (2227335) | 2227335..2227550 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QDW60_RS10995 (2227851) | 2227851..2228063 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QDW60_RS11000 (2228118) | 2228118..2228207 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| QDW60_RS11005 (2228485) | 2228485..2229237 | - | 753 | WP_001047135.1 | antitermination protein | - |
| QDW60_RS11010 (2229251) | 2229251..2230300 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| QDW60_RS11015 (2230302) | 2230302..2230580 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| QDW60_RS11020 (2230647) | 2230647..2230898 | - | 252 | WP_000980994.1 | protein Rem | - |
| QDW60_RS11025 (2231115) | 2231115..2231270 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QDW60_RS11030 (2231342) | 2231342..2231629 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QDW60_RS11035 (2231629) | 2231629..2231868 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QDW60_RS11040 (2231893) | 2231893..2232198 | + | 306 | WP_001326990.1 | protein YdfV | - |
| QDW60_RS11045 (2232401) | 2232401..2232733 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| QDW60_RS11050 (2233170) | 2233170..2233319 | - | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| QDW60_RS11055 (2233440) | 2233440..2234489 | - | 1050 | Protein_2161 | ISNCY family transposase ISCARN112 | Transposase |
| QDW60_RS11060 (2234544) | 2234544..2234963 | - | 420 | WP_001151195.1 | DUF977 family protein | - |
| QDW60_RS11065 (2235004) | 2235004..2235969 | - | 966 | WP_032084229.1 | phage O protein family | - |
| QDW60_RS11070 (2235950) | 2235950..2236471 | - | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| QDW60_RS11075 (2236455) | 2236455..2236682 | - | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| QDW60_RS11080 (2236760) | 2236760..2237166 | + | 407 | Protein_2166 | helix-turn-helix domain-containing protein | - |
| QDW60_RS11085 (2237359) | 2237359..2237514 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| QDW60_RS11090 (2237516) | 2237516..2237617 | + | 102 | Protein_2168 | protein YdfB | - |
| QDW60_RS11095 (2238578) | 2238578..2238766 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QDW60_RS11100 (2238763) | 2238763..2238954 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| QDW60_RS11105 (2239048) | 2239048..2241519 | + | 2472 | WP_000048324.1 | exonuclease | - |
| QDW60_RS11110 (2241592) | 2241592..2241843 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| QDW60_RS11115 (2241878) | 2241878..2243158 | + | 1281 | WP_021533434.1 | hypothetical protein ; Integrase | Integrase |
| QDW60_RS11120 (2243346) | 2243346..2244365 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| QDW60_RS11125 (2244377) | 2244377..2245591 | - | 1215 | WP_001619484.1 | starvation-sensing protein RspA | - |
| QDW60_RS11130 (2245797) | 2245797..2246123 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| QDW60_RS11135 (2246258) | 2246258..2246599 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| QDW60_RS11140 (2246634) | 2246634..2247194 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QDW60_RS11145 (2247197) | 2247197..2247907 | - | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| QDW60_RS11150 (2248027) | 2248027..2248709 | + | 683 | Protein_2180 | IS1 family transposase | - |
| QDW60_RS11155 (2248777) | 2248777..2249082 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| QDW60_RS11160 (2249281) | 2249281..2251707 | + | 2427 | WP_032083809.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|