MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 31040 bp
Accession: NZ_CP122651 Location: 1..31040 Organism: Escherichia coli strain ETEC4077 Replicon: plasmid unnamed3
Accession: NZ_CP122651 Location: 1..31040 Organism: Escherichia coli strain ETEC4077 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY56_RS27235 (QDY56_27235) | 1..4092 | + | 4092 | WP_032491197.1 | Serine protease SepA autotransporter | VF |
| QDY56_RS27240 (QDY56_27240) | 4295..4989 | + | 695 | WP_096169354.1 | IS1 family transposase IS1N | Transposase |
| QDY56_RS27245 (QDY56_27245) | 4994..5635 | + | 642 | WP_062873858.1 | toll/interleukin-1 receptor domain-containing protein | - |
| QDY56_RS27250 (QDY56_27250) | 5777..6172 | - | 396 | WP_000445930.1 | plasmid partitioning/stability family protein | - |
| QDY56_RS27255 (QDY56_27255) | 6172..7131 | - | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| QDY56_RS27260 (QDY56_27260) | 7570..8472 | + | 903 | WP_077628577.1 | DUF1281 domain-containing protein | - |
| QDY56_RS27265 (QDY56_27265) | 8476..8781 | + | 306 | WP_063085138.1 | hypothetical protein | - |
| QDY56_RS27270 (QDY56_27270) | 8858..9541 | + | 684 | WP_000085944.1 | DNA methylase | - |
| QDY56_RS27275 (QDY56_27275) | 9791..11548 | + | 1758 | Protein_8 | Multifunctional conjugation protein TraI | Relaxase |
| QDY56_RS27280 (QDY56_27280) | 11568..12314 | + | 747 | WP_000205711.1 | conjugal transfer pilus acetylase TraX | - |
| QDY56_RS27285 (QDY56_27285) | 12373..13233 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| QDY56_RS27290 (QDY56_27290) | 13336..13896 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| QDY56_RS27295 (QDY56_27295) | 14027..14236 | + | 210 | WP_001297500.1 | hypothetical protein | - |
| QDY56_RS27300 (QDY56_27300) | 14648..15274 | + | 627 | WP_000794191.1 | NYN domain-containing protein | - |
| QDY56_RS27305 (QDY56_27305) | 15426..16016 | + | 591 | WP_001375082.1 | DUF2726 domain-containing protein | - |
| QDY56_RS27310 (QDY56_27310) | 16256..16504 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| QDY56_RS27315 (QDY56_27315) | 16749..16823 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| QDY56_RS27320 (QDY56_27320) | 16816..17673 | + | 858 | WP_042634321.1 | incFII family plasmid replication initiator RepA | - |
| QDY56_RS27325 (QDY56_27325) | 18375..18515 | + | 141 | WP_001384252.1 | hypothetical protein | - |
| QDY56_RS27330 (QDY56_27330) | 18604..19107 | - | 504 | Protein_19 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QDY56_RS27335 (QDY56_27335) | 19291..20478 | - | 1188 | WP_086186060.1 | IS91 family transposase IS91 | Transposase |
| QDY56_RS27340 (QDY56_27340) | 20478..20843 | - | 366 | WP_000124096.1 | hypothetical protein | - |
| QDY56_RS27345 (QDY56_27345) | 20928..23399 | - | 2472 | Protein_22 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QDY56_RS27350 (QDY56_27350) | 23403..23963 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| QDY56_RS27355 (QDY56_27355) | 24273..25850 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| QDY56_RS27360 (QDY56_27360) | 26146..27183 | + | 1038 | WP_032083970.1 | DNA-binding protein | - |
| QDY56_RS27365 (QDY56_27365) | 27359..27628 | + | 270 | WP_000079937.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDY56_RS27370 (QDY56_27370) | 27628..27906 | + | 279 | WP_244461648.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDY56_RS27375 (QDY56_27375) | 28215..29357 | + | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| QDY56_RS27380 (QDY56_27380) | 29330..29434 | + | 105 | Protein_29 | hypothetical protein | - |
| QDY56_RS27385 (QDY56_27385) | 29446..29751 | + | 306 | WP_000482654.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|