MGE detailed information
MGE type: Prophage MGE length: 41292 bp
Accession: NZ_CP122648 Location: 4709047..4750338 Organism: Escherichia coli strain ETEC4077 Replicon: chromosome
Accession: NZ_CP122648 Location: 4709047..4750338 Organism: Escherichia coli strain ETEC4077 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY56_RS23275 (4704103) | 4704103..4704519 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| QDY56_RS23280 (4704630) | 4704630..4705343 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| QDY56_RS23285 (4705744) | 4705744..4705966 | + | 223 | Protein_4565 | hypothetical protein | - |
| QDY56_RS23290 (4706469) | 4706469..4707662 | - | 1194 | WP_000486950.1 | aromatic amino acid transaminase | - |
| QDY56_RS23295 (4707915) | 4707915..4708994 | - | 1080 | WP_001147321.1 | alanine racemase | - |
| QDY56_RS23300 (4709047) | 4709047..4710462 | - | 1416 | WP_063085440.1 | replicative DNA helicase | - |
| QDY56_RS23305 (4710545) | 4710545..4711528 | + | 984 | WP_001589538.1 | L-threonine 3-dehydrogenase | VF |
| QDY56_RS23310 (4711694) | 4711694..4711936 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| QDY56_RS23315 (4712070) | 4712070..4713107 | - | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| QDY56_RS23320 (4713196) | 4713196..4714293 | + | 1098 | WP_000332271.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QDY56_RS23325 (4714355) | 4714355..4714603 | + | 249 | WP_001217539.1 | DinI-like family protein | - |
| QDY56_RS23330 (4714721) | 4714721..4715008 | - | 288 | WP_021518238.1 | hypothetical protein | - |
| QDY56_RS23335 (4715051) | 4715051..4716091 | - | 1041 | WP_021518237.1 | tail fiber domain-containing protein | - |
| QDY56_RS23340 (4716101) | 4716101..4716382 | - | 282 | WP_021518236.1 | hypothetical protein | - |
| QDY56_RS23345 (4716382) | 4716382..4718481 | - | 2100 | Protein_4577 | prophage tail fiber N-terminal domain-containing protein | - |
| QDY56_RS23350 (4718595) | 4718595..4722074 | - | 3480 | WP_175286068.1 | host specificity protein J | - |
| QDY56_RS23355 (4722135) | 4722135..4722782 | - | 648 | WP_000741576.1 | tail assembly protein | - |
| QDY56_RS23360 (4722680) | 4722680..4723423 | - | 744 | WP_031935383.1 | C40 family peptidase | - |
| QDY56_RS23365 (4723428) | 4723428..4724126 | - | 699 | WP_001152341.1 | phage minor tail protein L | - |
| QDY56_RS23370 (4724136) | 4724136..4724465 | - | 330 | WP_001596839.1 | phage tail protein | - |
| QDY56_RS23375 (4724465) | 4724465..4725217 | - | 753 | Protein_4583 | phage tail tape measure protein | - |
| QDY56_RS23380 (4725309) | 4725309..4726079 | - | 771 | Protein_4584 | phage terminase large subunit family protein | - |
| QDY56_RS23385 (4726088) | 4726088..4726615 | - | 528 | WP_001389340.1 | DUF1441 family protein | - |
| QDY56_RS23390 (4727058) | 4727058..4727633 | + | 576 | WP_001189672.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| QDY56_RS23395 (4727705) | 4727705..4728082 | - | 378 | WP_063085036.1 | M15 family metallopeptidase | - |
| QDY56_RS23400 (4728085) | 4728085..4728360 | - | 276 | WP_063085037.1 | phage holin family protein | - |
| QDY56_RS23405 (4728350) | 4728350..4728742 | - | 393 | WP_032192285.1 | putative holin | - |
| QDY56_RS23415 (4729693) | 4729693..4730544 | - | 852 | WP_236265347.1 | HTH-type transcriptional activator RhaR | VF |
| QDY56_RS23420 (4730716) | 4730716..4731657 | + | 942 | WP_015987625.1 | hypothetical protein | - |
| QDY56_RS23425 (4731736) | 4731736..4732104 | + | 369 | WP_129110716.1 | hypothetical protein | - |
| QDY56_RS23430 (4732128) | 4732128..4732493 | - | 366 | WP_196042426.1 | antiterminator Q family protein | - |
| QDY56_RS23435 (4732508) | 4732508..4733497 | - | 990 | WP_063085034.1 | DUF968 domain-containing protein | - |
| QDY56_RS23440 (4733505) | 4733505..4734314 | - | 810 | WP_001061378.1 | KilA-N domain-containing protein | - |
| QDY56_RS23445 (4734334) | 4734334..4734723 | - | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QDY56_RS23450 (4734720) | 4734720..4735046 | - | 327 | WP_000210187.1 | LexA family transcriptional regulator | - |
| QDY56_RS23455 (4735043) | 4735043..4735696 | - | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| QDY56_RS23460 (4735711) | 4735711..4735794 | - | 84 | Protein_4599 | hypothetical protein | - |
| QDY56_RS23465 (4735791) | 4735791..4736783 | - | 993 | WP_000054957.1 | hypothetical protein | - |
| QDY56_RS23470 (4736740) | 4736740..4736952 | - | 213 | WP_001250270.1 | DUF4222 domain-containing protein | - |
| QDY56_RS23475 (4737128) | 4737128..4737712 | - | 585 | WP_000514174.1 | YmfL family putative regulatory protein | - |
| QDY56_RS23480 (4737740) | 4737740..4737937 | - | 198 | WP_001231956.1 | Cro/CI family transcriptional regulator | - |
| QDY56_RS23485 (4738033) | 4738033..4738686 | + | 654 | WP_000981537.1 | S24 family peptidase | - |
| QDY56_RS23490 (4739144) | 4739144..4739505 | + | 362 | Protein_4605 | protein YfdP | - |
| QDY56_RS23495 (4739571) | 4739571..4740395 | + | 825 | WP_097420368.1 | DUF2303 family protein | - |
| QDY56_RS23500 (4740524) | 4740524..4741060 | + | 537 | WP_112023950.1 | 5'-deoxynucleotidase | - |
| QDY56_RS23505 (4741051) | 4741051..4741413 | + | 363 | WP_001242718.1 | phage protein | - |
| QDY56_RS23510 (4741410) | 4741410..4741613 | + | 204 | WP_000111289.1 | hypothetical protein | - |
| QDY56_RS23515 (4741606) | 4741606..4741845 | + | 240 | WP_112023949.1 | hypothetical protein | - |
| QDY56_RS23520 (4741842) | 4741842..4742369 | + | 528 | WP_075843227.1 | ead/Ea22-like family protein | - |
| QDY56_RS23525 (4742371) | 4742371..4742562 | + | 192 | WP_001014290.1 | hypothetical protein | - |
| QDY56_RS23530 (4742565) | 4742565..4742879 | + | 315 | Protein_4613 | DUF551 domain-containing protein | - |
| QDY56_RS23535 (4743126) | 4743126..4743317 | + | 192 | WP_001690200.1 | DUF551 domain-containing protein | - |
| QDY56_RS23540 (4743317) | 4743317..4743889 | + | 573 | WP_001061345.1 | 3'-5' exonuclease | - |
| QDY56_RS23545 (4743926) | 4743926..4744207 | + | 282 | WP_001093917.1 | pyocin activator PrtN family protein | - |
| QDY56_RS23550 (4744254) | 4744254..4744427 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| QDY56_RS23555 (4744467) | 4744467..4744853 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| QDY56_RS23560 (4744883) | 4744883..4745392 | - | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| QDY56_RS23565 (4745709) | 4745709..4745813 | - | 105 | Protein_4620 | tRNA-dihydrouridine synthase | - |
| QDY56_RS23570 (4746176) | 4746176..4747132 | - | 957 | WP_063085441.1 | DUF2713 family protein | - |
| QDY56_RS23575 (4747450) | 4747450..4747965 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| QDY56_RS23580 (4748007) | 4748007..4748216 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| QDY56_RS23585 (4748332) | 4748332..4749657 | - | 1326 | WP_001545103.1 | MATE family efflux transporter DinF | - |
| QDY56_RS23590 (4749730) | 4749730..4750338 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| QDY56_RS23595 (4750448) | 4750448..4750816 | - | 369 | WP_000002913.1 | diacylglycerol kinase | - |
| QDY56_RS23600 (4750987) | 4750987..4753410 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| QDY56_RS23605 (4753565) | 4753565..4754437 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| QDY56_RS23610 (4754450) | 4754450..4754947 | - | 498 | WP_001468913.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|