MGE detailed information
MGE type: Prophage MGE length: 41291 bp
Accession: NZ_CP122643 Location: 4699919..4741209 Organism: Escherichia coli strain ETEC4079 Replicon: chromosome
Accession: NZ_CP122643 Location: 4699919..4741209 Organism: Escherichia coli strain ETEC4079 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW55_RS23225 (4694975) | 4694975..4695391 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| QDW55_RS23230 (4695502) | 4695502..4696215 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| QDW55_RS23235 (4696616) | 4696616..4696838 | + | 223 | Protein_4555 | hypothetical protein | - |
| QDW55_RS23240 (4697341) | 4697341..4698534 | - | 1194 | WP_000486950.1 | aromatic amino acid transaminase | - |
| QDW55_RS23245 (4698787) | 4698787..4699866 | - | 1080 | WP_001147321.1 | alanine racemase | - |
| QDW55_RS23250 (4699919) | 4699919..4701334 | - | 1416 | WP_063085440.1 | replicative DNA helicase | - |
| QDW55_RS23255 (4701417) | 4701417..4702400 | + | 984 | WP_001589538.1 | Quinone oxidoreductase 1 | VF |
| QDW55_RS23260 (4702566) | 4702566..4702808 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| QDW55_RS23265 (4702942) | 4702942..4703979 | - | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| QDW55_RS23270 (4704068) | 4704068..4705165 | + | 1098 | WP_000332271.1 | hypothetical protein ; Integrase | Integrase |
| QDW55_RS23275 (4705227) | 4705227..4705475 | + | 249 | WP_001217539.1 | DinI-like family protein | - |
| QDW55_RS23280 (4705593) | 4705593..4705880 | - | 288 | WP_021518238.1 | hypothetical protein | - |
| QDW55_RS23285 (4705923) | 4705923..4706963 | - | 1041 | WP_021518237.1 | tail fiber domain-containing protein | - |
| QDW55_RS23290 (4706973) | 4706973..4707254 | - | 282 | WP_021518236.1 | hypothetical protein | - |
| QDW55_RS23295 (4707254) | 4707254..4709353 | - | 2100 | Protein_4567 | prophage tail fiber N-terminal domain-containing protein | - |
| QDW55_RS23300 (4709467) | 4709467..4712946 | - | 3480 | WP_175286068.1 | host specificity protein J | - |
| QDW55_RS23305 (4713007) | 4713007..4713654 | - | 648 | WP_000741576.1 | tail assembly protein | - |
| QDW55_RS23310 (4713552) | 4713552..4714295 | - | 744 | WP_031935383.1 | C40 family peptidase | - |
| QDW55_RS23315 (4714300) | 4714300..4714998 | - | 699 | WP_001152341.1 | phage minor tail protein L | - |
| QDW55_RS23320 (4715008) | 4715008..4715337 | - | 330 | WP_001596839.1 | phage tail protein | - |
| QDW55_RS23325 (4715337) | 4715337..4716089 | - | 753 | Protein_4573 | phage tail tape measure protein | - |
| QDW55_RS23330 (4716181) | 4716181..4716951 | - | 771 | Protein_4574 | phage terminase large subunit family protein | - |
| QDW55_RS23335 (4716960) | 4716960..4717487 | - | 528 | WP_001389340.1 | DUF1441 family protein | - |
| QDW55_RS23340 (4717930) | 4717930..4718505 | + | 576 | WP_001189672.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| QDW55_RS23345 (4718577) | 4718577..4718954 | - | 378 | WP_063085036.1 | M15 family metallopeptidase | - |
| QDW55_RS23350 (4718957) | 4718957..4719232 | - | 276 | WP_063085037.1 | phage holin family protein | - |
| QDW55_RS23355 (4719222) | 4719222..4719614 | - | 393 | WP_032192285.1 | putative holin | - |
| QDW55_RS23365 (4720565) | 4720565..4721416 | - | 852 | WP_236265347.1 | HTH-type transcriptional regulator GadW | VF |
| QDW55_RS23370 (4721815) | 4721815..4722528 | + | 714 | WP_001422966.1 | hypothetical protein | - |
| QDW55_RS23375 (4722607) | 4722607..4722975 | + | 369 | WP_129110716.1 | hypothetical protein | - |
| QDW55_RS23380 (4722999) | 4722999..4723364 | - | 366 | WP_196042426.1 | antiterminator Q family protein | - |
| QDW55_RS23385 (4723379) | 4723379..4724368 | - | 990 | WP_063085034.1 | DUF968 domain-containing protein | - |
| QDW55_RS23390 (4724376) | 4724376..4725185 | - | 810 | WP_001061378.1 | KilA-N domain-containing protein | - |
| QDW55_RS23395 (4725205) | 4725205..4725594 | - | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QDW55_RS23400 (4725591) | 4725591..4725917 | - | 327 | WP_000210187.1 | LexA family transcriptional regulator | - |
| QDW55_RS23405 (4725914) | 4725914..4726567 | - | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| QDW55_RS23410 (4726582) | 4726582..4726665 | - | 84 | Protein_4589 | hypothetical protein | - |
| QDW55_RS23415 (4726662) | 4726662..4727654 | - | 993 | WP_000054957.1 | hypothetical protein | - |
| QDW55_RS23420 (4727611) | 4727611..4727823 | - | 213 | WP_001250270.1 | DUF4222 domain-containing protein | - |
| QDW55_RS23425 (4727999) | 4727999..4728583 | - | 585 | WP_000514174.1 | YmfL family putative regulatory protein | - |
| QDW55_RS23430 (4728611) | 4728611..4728808 | - | 198 | WP_001231956.1 | Cro/CI family transcriptional regulator | - |
| QDW55_RS23435 (4728904) | 4728904..4729557 | + | 654 | WP_000981537.1 | S24 family peptidase | - |
| QDW55_RS23440 (4730015) | 4730015..4730376 | + | 362 | Protein_4595 | protein YfdP | - |
| QDW55_RS23445 (4730442) | 4730442..4731266 | + | 825 | WP_097420368.1 | DUF2303 family protein | - |
| QDW55_RS23450 (4731395) | 4731395..4731931 | + | 537 | WP_112023950.1 | 5'-deoxynucleotidase | - |
| QDW55_RS23455 (4731922) | 4731922..4732284 | + | 363 | WP_001242718.1 | phage protein | - |
| QDW55_RS23460 (4732281) | 4732281..4732484 | + | 204 | WP_000111289.1 | hypothetical protein | - |
| QDW55_RS23465 (4732477) | 4732477..4732716 | + | 240 | WP_112023949.1 | hypothetical protein | - |
| QDW55_RS23470 (4732713) | 4732713..4733240 | + | 528 | WP_075843227.1 | ead/Ea22-like family protein | - |
| QDW55_RS23475 (4733242) | 4733242..4733433 | + | 192 | WP_001014290.1 | hypothetical protein | - |
| QDW55_RS23480 (4733436) | 4733436..4733750 | + | 315 | Protein_4603 | DUF551 domain-containing protein | - |
| QDW55_RS23485 (4733997) | 4733997..4734188 | + | 192 | WP_001690200.1 | DUF551 domain-containing protein | - |
| QDW55_RS23490 (4734188) | 4734188..4734760 | + | 573 | WP_001061345.1 | 3'-5' exonuclease | - |
| QDW55_RS23495 (4734797) | 4734797..4735078 | + | 282 | WP_001093917.1 | pyocin activator PrtN family protein | - |
| QDW55_RS23500 (4735125) | 4735125..4735298 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| QDW55_RS23505 (4735338) | 4735338..4735724 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| QDW55_RS23510 (4735754) | 4735754..4736263 | - | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| QDW55_RS23515 (4736580) | 4736580..4736684 | - | 105 | Protein_4610 | tRNA-dihydrouridine synthase | - |
| QDW55_RS23520 (4737047) | 4737047..4738003 | - | 957 | WP_063085441.1 | DUF2713 family protein | - |
| QDW55_RS23525 (4738321) | 4738321..4738836 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| QDW55_RS23530 (4738878) | 4738878..4739087 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| QDW55_RS23535 (4739203) | 4739203..4740528 | - | 1326 | WP_001545103.1 | MATE family efflux transporter DinF | - |
| QDW55_RS23540 (4740601) | 4740601..4741209 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| QDW55_RS23545 (4741319) | 4741319..4741687 | - | 369 | WP_000002913.1 | diacylglycerol kinase | - |
| QDW55_RS23550 (4741858) | 4741858..4744281 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| QDW55_RS23555 (4744436) | 4744436..4745308 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| QDW55_RS23560 (4745321) | 4745321..4745818 | - | 498 | WP_001468913.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|