MGE detailed information
MGE type: Genomic_island MGE length: 39260 bp
Accession: NZ_CP122643 Location: 4575878..4615137 Organism: Escherichia coli strain ETEC4079 Replicon: chromosome
Accession: NZ_CP122643 Location: 4575878..4615137 Organism: Escherichia coli strain ETEC4079 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW55_RS22625 (4571199) | 4571199..4571537 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| QDW55_RS22630 (4571513) | 4571513..4573210 | + | 1698 | WP_000068919.1 | protein-disulfide reductase DsbD | - |
| QDW55_RS22635 (4573247) | 4573247..4573822 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QDW55_RS22645 (4574202) | 4574202..4575464 | + | 1263 | WP_063086402.1 | integrase arm-type DNA-binding domain-containing protein | - |
| QDW55_RS22650 (4575633) | 4575633..4575813 | + | 181 | Protein_4438 | transposase domain-containing protein | - |
| QDW55_RS22655 (4575845) | 4575845..4576237 | + | 393 | Protein_4439 | IS4 family transposase IS4 | Transposase |
| QDW55_RS22660 (4576247) | 4576247..4576561 | - | 315 | Protein_4440 | IS66 family transposase ISCro1 | Transposase |
| QDW55_RS22665 (4576616) | 4576616..4577059 | + | 444 | Protein_4441 | IS66 family transposase ISEc43 | Transposase |
| QDW55_RS22670 (4577194) | 4577194..4578522 | + | 1329 | WP_000019626.1 | nucleotidyltransferase | - |
| QDW55_RS22675 (4578545) | 4578545..4579105 | + | 561 | WP_224471524.1 | SLATT domain-containing protein | - |
| QDW55_RS22680 (4579657) | 4579657..4580382 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| QDW55_RS22685 (4580379) | 4580379..4581683 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| QDW55_RS22690 (4581680) | 4581680..4582432 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| QDW55_RS22695 (4582432) | 4582432..4584216 | - | 1785 | WP_000269401.1 | P-loop NTPase fold protein | - |
| QDW55_RS22700 (4584348) | 4584348..4585613 | - | 1266 | WP_032189653.1 | hypothetical protein | - |
| QDW55_RS22705 (4585852) | 4585852..4586109 | - | 258 | Protein_4449 | VasL domain-containing protein | - |
| QDW55_RS22710 (4586822) | 4586822..4587013 | + | 192 | WP_001287884.1 | DUF4222 domain-containing protein | - |
| QDW55_RS22715 (4587066) | 4587066..4587299 | - | 234 | WP_000124191.1 | hypothetical protein | - |
| QDW55_RS22720 (4587395) | 4587395..4588018 | - | 624 | WP_001364382.1 | hypothetical protein | - |
| QDW55_RS22725 (4588152) | 4588152..4588322 | - | 171 | WP_001216315.1 | hypothetical protein | - |
| QDW55_RS22730 (4588328) | 4588328..4588741 | - | 414 | WP_001013297.1 | putative zinc ribbon protein | - |
| QDW55_RS22735 (4588738) | 4588738..4589121 | - | 384 | WP_000270991.1 | putative zinc ribbon protein | - |
| QDW55_RS22740 (4589381) | 4589381..4589950 | - | 570 | WP_000148635.1 | inovirus Gp2 family protein | - |
| QDW55_RS22745 (4590154) | 4590154..4590351 | + | 198 | WP_074156802.1 | hypothetical protein | - |
| QDW55_RS22750 (4590690) | 4590690..4590902 | - | 213 | WP_000453333.1 | hemolysin expression modulator Hha | - |
| QDW55_RS22755 (4591605) | 4591605..4591811 | + | 207 | WP_001025263.1 | AlpA family transcriptional regulator | - |
| QDW55_RS22760 (4591897) | 4591897..4592469 | + | 573 | WP_001170556.1 | hypothetical protein | - |
| QDW55_RS22765 (4592584) | 4592584..4594089 | - | 1506 | WP_063086396.1 | YfjI family protein | - |
| QDW55_RS22770 (4595274) | 4595274..4596146 | + | 873 | WP_282842969.1 | GTPase family protein | - |
| QDW55_RS22775 (4596518) | 4596518..4599364 | + | 2847 | WP_063086393.1 | Ag43/Cah family autotransporter adhesin | - |
| QDW55_RS22780 (4599692) | 4599692..4600510 | + | 819 | WP_001234392.1 | DUF932 domain-containing protein | - |
| QDW55_RS22785 (4600602) | 4600602..4601087 | + | 486 | WP_000213706.1 | antirestriction protein | - |
| QDW55_RS22790 (4601102) | 4601102..4601578 | + | 477 | WP_001186784.1 | RadC family protein | - |
| QDW55_RS22795 (4601647) | 4601647..4601868 | + | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| QDW55_RS22800 (4601887) | 4601887..4602531 | + | 645 | WP_000086748.1 | hypothetical protein | - |
| QDW55_RS22805 (4602581) | 4602581..4602949 | + | 369 | WP_032178229.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QDW55_RS22810 (4603039) | 4603039..4603416 | + | 378 | WP_000854800.1 | TA system toxin CbtA family protein | Toxin Detail |
| QDW55_RS22815 (4603413) | 4603413..4603901 | + | 489 | WP_000779171.1 | DUF5983 family protein | - |
| QDW55_RS22820 (4603913) | 4603913..4604110 | + | 198 | WP_001374283.1 | DUF957 domain-containing protein | - |
| QDW55_RS22825 (4604195) | 4604195..4605037 | + | 843 | WP_063086391.1 | DUF4942 domain-containing protein | - |
| QDW55_RS22830 (4605786) | 4605786..4607324 | + | 1539 | WP_001187196.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QDW55_RS22835 (4607690) | 4607690..4609024 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QDW55_RS22840 (4609104) | 4609104..4611251 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QDW55_RS22845 (4611310) | 4611310..4612767 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| QDW55_RS22850 (4613004) | 4613004..4614521 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QDW55_RS22855 (4614640) | 4614640..4614813 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QDW55_RS22860 (4614841) | 4614841..4615137 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QDW55_RS22865 (4615364) | 4615364..4615636 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QDW55_RS22870 (4615648) | 4615648..4615878 | - | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QDW55_RS22875 (4616058) | 4616058..4617689 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| QDW55_RS22880 (4617686) | 4617686..4618405 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|